RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 JARID2Q92833 1246 aaPredicted RBP9.2□□□□□ -0.94
RTF1-204ENST00000558117 PLPPR2Q96GM1 343 aa9.2□□□□□ -0.94
RTF1-204ENST00000558117 TMEM74Q96NL1 305 aa9.2□□□□□ -0.94
RTF1-204ENST00000558117 PIM2Q9P1W9 311 aa9.2□□□□□ -0.94
RTF1-204ENST00000558117 GGT7Q9UJ14 662 aa9.2□□□□□ -0.94
RTF1-204ENST00000558117 SNCAIPQ9Y6H5 919 aa9.2□□□□□ -0.94
RTF1-204ENST00000558117 SLIT1O75093 1534 aa9.2□□□□□ -0.94
RTF1-204ENST00000558117 RBM25P49756 843 aaKnown RBP9.19□□□□□ -0.94
RTF1-204ENST00000558117 FAM160A1Q05DH4 1040 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 CDK5R2Q13319 367 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 CAMK2GQ13555 558 aaPredicted RBP9.19□□□□□ -0.94
RTF1-204ENST00000558117 LRFN4Q6PJG9 635 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 SEZ6L2Q6UXD5 910 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 Q8N3U1 123 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 KCT2Q8NC54 265 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 RHOVQ96L33 236 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 ZFP64Q9NPA5 681 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 C1GALT1Q9NS00 363 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 PCMTD2Q9NV79 361 aa9.19□□□□□ -0.94
RTF1-204ENST00000558117 TROQ12816 1431 aaPredicted RBP9.19□□□□□ -0.94
RTF1-204ENST00000558117 PRR19A6NJB7 356 aa9.18□□□□□ -0.94
RTF1-204ENST00000558117 FAM170BA6NMN3 283 aa9.18□□□□□ -0.94
RTF1-204ENST00000558117 KDM5AP29375 1690 aaKnown RBP9.18□□□□□ -0.94
RTF1-204ENST00000558117 ZNF76P36508 570 aa9.18□□□□□ -0.94
RTF1-204ENST00000558117 CYP27C1Q4G0S4 372 aa9.18□□□□□ -0.94
RTF1-204ENST00000558117 ARTNQ5T4W7 220 aa9.18□□□□□ -0.94
RTF1-204ENST00000558117 ZBTB37Q5TC79 503 aa9.18□□□□□ -0.94
RTF1-204ENST00000558117 BNC2Q6ZN30 1099 aaPredicted RBP9.18□□□□□ -0.94
RTF1-204ENST00000558117 BRINP3Q76B58 766 aa9.18□□□□□ -0.94
RTF1-204ENST00000558117 HS2ST1Q7LGA3 356 aa9.18□□□□□ -0.94
RTF1-204ENST00000558117 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
RTF1-204ENST00000558117 MAST1Q9Y2H9 1570 aa9.17□□□□□ -0.94
RTF1-204ENST00000558117 PNPLA6Q8IY17 1366 aa9.17□□□□□ -0.94
RTF1-204ENST00000558117 WASHC2CQ9Y4E1 1318 aa9.17□□□□□ -0.94
RTF1-204ENST00000558117 HNRNPMP52272 730 aaKnown RBP eCLIP9.17□□□□□ -0.94
RTF1-204ENST00000558117 ETF1P62495 437 aaKnown RBP9.17□□□□□ -0.94
RTF1-204ENST00000558117 LMNB2Q03252 620 aa9.17□□□□□ -0.94
RTF1-204ENST00000558117 RING1Q06587 406 aa9.17□□□□□ -0.94
RTF1-204ENST00000558117 ZNF507Q8TCN5 953 aa9.17□□□□□ -0.94
RTF1-204ENST00000558117 GATA6Q92908 595 aa9.17□□□□□ -0.94
RTF1-204ENST00000558117 INO80Q9ULG1 1556 aaPredicted RBP9.16□□□□□ -0.94
RTF1-204ENST00000558117 CYP26A1O43174 497 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 BPNT1O95861 308 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 FAM87AP0C7U9 286 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 GARTP22102 1010 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 OGFOD3Q6PK18 319 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 ZNF765Q7L2R6 523 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 CYFIP1Q7L576 1253 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 SHISA5Q8N114 240 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 LRRC59Q96AG4 307 aaKnown RBP9.16□□□□□ -0.94
RTF1-204ENST00000558117 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 EID1Q9Y6B2 187 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 PREX2Q70Z35 1606 aa9.16□□□□□ -0.94
RTF1-204ENST00000558117 SCAMP3O14828 347 aaKnown RBP9.15□□□□□ -0.94
RTF1-204ENST00000558117 HYAL3O43820 417 aaPredicted RBP9.15□□□□□ -0.94
RTF1-204ENST00000558117 CD97P48960 835 aa9.15□□□□□ -0.94
RTF1-204ENST00000558117 NBPF11Q86T75 865 aa9.15□□□□□ -0.94
RTF1-204ENST00000558117 RNF34Q969K3 372 aa9.15□□□□□ -0.94
RTF1-204ENST00000558117 LRRC4CQ9HCJ2 640 aa9.15□□□□□ -0.94
RTF1-204ENST00000558117 METTL5Q9NRN9 209 aaKnown RBP9.15□□□□□ -0.94
RTF1-204ENST00000558117 ADGBQ8N7X0 1667 aa9.15□□□□□ -0.94
RTF1-204ENST00000558117 UBR1Q8IWV7 1749 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 NINLQ9Y2I6 1382 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 FAM221AA4D161 298 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 GFRA2O00451 464 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 F13A1P00488 732 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 FOSL1P15407 271 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 NTF4P34130 210 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 ZNF394Q53GI3 561 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 SNAP47Q5SQN1 464 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 C9orf131Q5VYM1 1079 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 FBXL19Q6PCT2 694 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 UBE3DQ7Z6J8 389 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 CCDC84Q86UT8 332 aaPredicted RBP9.14□□□□□ -0.95
RTF1-204ENST00000558117 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 GOLM1Q8NBJ4 401 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 WNT10AQ9GZT5 417 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 UNC13BO14795 1591 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 SYCP2Q9BX26 1530 aa9.14□□□□□ -0.95
RTF1-204ENST00000558117 TET3O43151 1660 aa9.13□□□□□ -0.95
RTF1-204ENST00000558117 DHX29Q7Z478 1369 aaKnown RBP9.13□□□□□ -0.95
RTF1-204ENST00000558117 KIF3BO15066 747 aa9.13□□□□□ -0.95
RTF1-204ENST00000558117 EIF4A3P38919 411 aaKnown RBP9.13□□□□□ -0.95
RTF1-204ENST00000558117 RANGAP1P46060 587 aaPredicted RBP9.13□□□□□ -0.95
RTF1-204ENST00000558117 HDLBPQ00341 1268 aaKnown RBP9.13□□□□□ -0.95
RTF1-204ENST00000558117 RPL6Q02878 288 aaKnown RBP9.13□□□□□ -0.95
RTF1-204ENST00000558117 PDE4BQ07343 736 aa9.13□□□□□ -0.95
RTF1-204ENST00000558117 ARHGAP27Q6ZUM4 889 aa9.13□□□□□ -0.95
RTF1-204ENST00000558117 METTL16Q86W50 562 aaKnown RBP9.13□□□□□ -0.95
RTF1-204ENST00000558117 ADAMTS1Q9UHI8 967 aa9.13□□□□□ -0.95
RTF1-204ENST00000558117 NCOA3Q9Y6Q9 1424 aa9.13□□□□□ -0.95
RTF1-204ENST00000558117 KIAA1324LA8MWY0 1029 aaPredicted RBP9.12□□□□□ -0.95
RTF1-204ENST00000558117 CILPO75339 1184 aa9.12□□□□□ -0.95
RTF1-204ENST00000558117 HOXA10P31260 410 aaPredicted RBP9.12□□□□□ -0.95
RTF1-204ENST00000558117 GRK4P32298 578 aa9.12□□□□□ -0.95
RTF1-204ENST00000558117 PRELPP51888 382 aa9.12□□□□□ -0.95
RTF1-204ENST00000558117 FBXO27Q8NI29 283 aa9.12□□□□□ -0.95
RTF1-204ENST00000558117 GATAD2BQ8WXI9 593 aa9.12□□□□□ -0.95
RTF1-204ENST00000558117 DUSP23Q9BVJ7 150 aa9.12□□□□□ -0.95
RTF1-204ENST00000558117 PCDHGB7Q9Y5F8 929 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms