RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
SNRPA1-206ENST00000558059 MORF4L1Q9UBU8 362 aa10.54□□□□□ -0.72
SNRPA1-206ENST00000558059 PLXNB2O15031 1838 aa10.54□□□□□ -0.72
SNRPA1-206ENST00000558059 RLFQ13129 1914 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L15C9J2P7 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L13C9JLJ4 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L11C9JVI0 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L18D6R9N7 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L22D6RA61 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L17D6RBQ6 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L19D6RCP7 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L20D6RJB6 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 MPHOSPH10O00566 681 aaKnown RBP10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 TNPO2O14787 897 aaKnown RBP10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 EN2P19622 333 aaPredicted RBP10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 GRK4P32298 578 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 FLT3LGP49771 235 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 USP17L24Q0WX57 530 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 LRRFIP1Q32MZ4 808 aaKnown RBP10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 ZMYM1Q5SVZ6 1142 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 TMEM179Q6ZVK1 233 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 AMOTL1Q8IY63 956 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 DDRGK1Q96HY6 314 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 CCDC17Q96LX7 622 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 FSD1Q9BTV5 496 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 LNPKQ9C0E8 428 aa10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 EPB41L4AQ9HCS5 686 aaPredicted RBP10.53□□□□□ -0.72
SNRPA1-206ENST00000558059 PATL2C9JE40 543 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 MYCP01106 439 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 GNAT2P19087 354 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 VCAM1P19320 739 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 IRF5Q13568 498 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 MTFR1Q15390 333 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 Q3C1V9 767 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 KIAA1755Q5JYT7 1200 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 B4GALNT3Q6L9W6 998 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 CATSPERGQ6ZRH7 1159 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 CLEC10AQ8IUN9 316 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 GPRC5AQ8NFJ5 357 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 COA7Q96BR5 231 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 ARPP21Q9UBL0 812 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 CEP290O15078 2479 aa10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 GREB1LQ9C091 1923 aaPredicted RBP10.52□□□□□ -0.73
SNRPA1-206ENST00000558059 MINDY4BA8MYZ0 360 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 ADCY3O60266 1144 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 CNMDO75829 334 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 ERVK-9P63128 1117 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 ERVK-24P63145 666 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 NUCB1Q02818 461 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 IFNL3Q8IZI9 196 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 SLAIN1Q8ND83 568 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 GTF3C2Q8WUA4 911 aaPredicted RBP10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 EVI5LQ96CN4 794 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 RPAP3Q9H6T3 665 aaPredicted RBP10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 TMX2Q9Y320 296 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 RABGAP1Q9Y3P9 1069 aa10.51□□□□□ -0.73
SNRPA1-206ENST00000558059 PARP14Q460N5 1801 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 FOXP2O15409 715 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 APPP05067 770 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 ELNP15502 786 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 RASA1P20936 1047 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 ICA1Q05084 483 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 LBX2Q6XYB7 198 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 CHD1LQ86WJ1 897 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 PLEKHM2Q8IWE5 1019 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 PXYLP1Q8TE99 480 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 FAM212AQ96EL1 285 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 PAGR1Q9BTK6 254 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 PORCNQ9H237 461 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 KANSL2Q9H9L4 492 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 MYH4Q9Y623 1939 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 ROBO3Q96MS0 1386 aa10.5□□□□□ -0.73
SNRPA1-206ENST00000558059 ZNFX1Q9P2E3 1918 aaKnown RBP10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 SPDYE16A6NNV3 312 aaPredicted RBP10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 CCL5P13501 91 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 EEF2P13639 858 aaKnown RBP10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 TDO2P48775 406 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 COG2Q14746 738 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 CCDC129Q6ZRS4 1044 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 TICAM2Q86XR7 235 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 STK11IPQ8N1F8 1099 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 UNC93B1Q9H1C4 597 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 VCPKMTQ9H867 229 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 ARHGEF10LQ9HCE6 1279 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 BTBD7Q9P203 1132 aa10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
SNRPA1-206ENST00000558059 IGKV6D-41A0A0C4DH26 115 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 INHAP05111 366 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 GJB1P08034 283 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 MAPK4P31152 587 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 UBXN2AP68543 259 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 IRX6P78412 446 aaPredicted RBP10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 SPICE1Q8N0Z3 855 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 LPAR1Q92633 364 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 USP6NLQ92738 828 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 SHISA4Q96DD7 197 aa10.48□□□□□ -0.73
SNRPA1-206ENST00000558059 FAM227BQ96M60 508 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms