RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 RALYLQ86SE5 291 aaKnown RBP30.13■■■□□ 2.41
SMAD6-202ENST00000557916 NCOA7Q8NI08 942 aa30.13■■■□□ 2.41
SMAD6-202ENST00000557916 R3HDMLQ9H3Y0 253 aa30.13■■■□□ 2.41
SMAD6-202ENST00000557916 CTCFP49711 727 aaPredicted RBP30.12■■■□□ 2.41
SMAD6-202ENST00000557916 KIAA1755Q5JYT7 1200 aa30.12■■■□□ 2.41
SMAD6-202ENST00000557916 IQCA1Q86XH1 822 aa30.12■■■□□ 2.41
SMAD6-202ENST00000557916 LPAR1Q92633 364 aa30.12■■■□□ 2.41
SMAD6-202ENST00000557916 PARK7Q99497 189 aaKnown RBP30.12■■■□□ 2.41
SMAD6-202ENST00000557916 ZKSCAN3Q9BRR0 538 aa30.12■■■□□ 2.41
SMAD6-202ENST00000557916 RAD21O60216 631 aa30.11■■■□□ 2.41
SMAD6-202ENST00000557916 CYP2C8P10632 490 aa30.11■■■□□ 2.41
SMAD6-202ENST00000557916 OSBPP22059 807 aa30.11■■■□□ 2.41
SMAD6-202ENST00000557916 HOXA7P31268 230 aaPredicted RBP30.11■■■□□ 2.41
SMAD6-202ENST00000557916 SPICE1Q8N0Z3 855 aa30.11■■■□□ 2.41
SMAD6-202ENST00000557916 PNMA3Q9UL41 463 aa30.11■■■□□ 2.41
SMAD6-202ENST00000557916 SYNPO2Q9UMS6 1093 aa30.11■■■□□ 2.41
SMAD6-202ENST00000557916 EPB41L2O43491 1005 aaKnown RBP30.1■■■□□ 2.41
SMAD6-202ENST00000557916 NOVP48745 357 aa30.1■■■□□ 2.41
SMAD6-202ENST00000557916 CCDC178Q5BJE1 867 aa30.1■■■□□ 2.41
SMAD6-202ENST00000557916 LRRC47Q8N1G4 583 aaKnown RBP30.1■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L15C9J2P7 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L13C9JLJ4 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L11C9JVI0 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L18D6R9N7 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L22D6RA61 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L17D6RBQ6 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L19D6RCP7 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L20D6RJB6 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 F5H6K3 240 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 HSPA8P11142 646 aaKnown RBP30.09■■■□□ 2.41
SMAD6-202ENST00000557916 KLRC3Q07444 240 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 USP17L24Q0WX57 530 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 TTC14Q96N46 770 aa30.09■■■□□ 2.41
SMAD6-202ENST00000557916 ZSCAN10Q96SZ4 725 aaPredicted RBP30.09■■■□□ 2.41
SMAD6-202ENST00000557916 ASCC2Q9H1I8 757 aaPredicted RBP30.09■■■□□ 2.41
SMAD6-202ENST00000557916 RPAP3Q9H6T3 665 aaPredicted RBP30.09■■■□□ 2.41
SMAD6-202ENST00000557916 ZKSCAN1P17029 563 aaPredicted RBP30.08■■■□□ 2.41
SMAD6-202ENST00000557916 HSPA4P34932 840 aa30.08■■■□□ 2.41
SMAD6-202ENST00000557916 IRX3P78415 501 aaPredicted RBP30.08■■■□□ 2.41
SMAD6-202ENST00000557916 CYB5R4Q7L1T6 521 aa30.08■■■□□ 2.41
SMAD6-202ENST00000557916 RASEFQ8IZ41 740 aa30.08■■■□□ 2.41
SMAD6-202ENST00000557916 USP26Q9BXU7 913 aa30.08■■■□□ 2.41
SMAD6-202ENST00000557916 TLR2O60603 784 aa30.07■■■□□ 2.4
SMAD6-202ENST00000557916 CATSPERGQ6ZRH7 1159 aa30.07■■■□□ 2.4
SMAD6-202ENST00000557916 UBAC1Q9BSL1 405 aa30.07■■■□□ 2.4
SMAD6-202ENST00000557916 WDR46O15213 610 aaKnown RBP30.06■■■□□ 2.4
SMAD6-202ENST00000557916 EIF5BO60841 1220 aaKnown RBP30.06■■■□□ 2.4
SMAD6-202ENST00000557916 TOP1P11387 765 aaKnown RBP30.06■■■□□ 2.4
SMAD6-202ENST00000557916 LBX1P52954 281 aa30.06■■■□□ 2.4
SMAD6-202ENST00000557916 RCSD1Q6JBY9 416 aa30.06■■■□□ 2.4
SMAD6-202ENST00000557916 DGKHQ86XP1 1220 aa30.06■■■□□ 2.4
SMAD6-202ENST00000557916 GMCL1P1Q8NEA9 526 aa30.06■■■□□ 2.4
SMAD6-202ENST00000557916 SMCR8Q8TEV9 937 aaPredicted RBP30.06■■■□□ 2.4
SMAD6-202ENST00000557916 TMEM47Q9BQJ4 181 aa30.06■■■□□ 2.4
SMAD6-202ENST00000557916 MYH4Q9Y623 1939 aa30.06■■■□□ 2.4
SMAD6-202ENST00000557916 GPR25O00155 361 aa30.05■■■□□ 2.4
SMAD6-202ENST00000557916 NDUFB10O96000 172 aa30.05■■■□□ 2.4
SMAD6-202ENST00000557916 TSGA10IPQ3SY00 556 aa30.05■■■□□ 2.4
SMAD6-202ENST00000557916 MB21D2Q8IYB1 491 aaPredicted RBP30.05■■■□□ 2.4
SMAD6-202ENST00000557916 P2RX7Q99572 595 aaKnown RBP30.05■■■□□ 2.4
SMAD6-202ENST00000557916 TANGO6Q9C0B7 1094 aa30.05■■■□□ 2.4
SMAD6-202ENST00000557916 TNKSO95271 1327 aa30.05■■■□□ 2.4
SMAD6-202ENST00000557916 SLFN13Q68D06 897 aa30.05■■■□□ 2.4
SMAD6-202ENST00000557916 KCNB2Q92953 911 aa30.05■■■□□ 2.4
SMAD6-202ENST00000557916 ADGRA2Q96PE1 1338 aa30.04■■■□□ 2.4
SMAD6-202ENST00000557916 KRT32Q14532 448 aa30.04■■■□□ 2.4
SMAD6-202ENST00000557916 NOM1Q5C9Z4 860 aaKnown RBP30.04■■■□□ 2.4
SMAD6-202ENST00000557916 ENAHQ8N8S7 591 aaPredicted RBP30.04■■■□□ 2.4
SMAD6-202ENST00000557916 CPA4Q9UI42 421 aa30.04■■■□□ 2.4
SMAD6-202ENST00000557916 FAM83BQ5T0W9 1011 aa30.03■■■□□ 2.4
SMAD6-202ENST00000557916 CHST3Q7LGC8 479 aa30.03■■■□□ 2.4
SMAD6-202ENST00000557916 ANKS1AQ92625 1134 aa30.03■■■□□ 2.4
SMAD6-202ENST00000557916 NUP88Q99567 741 aaPredicted RBP30.03■■■□□ 2.4
SMAD6-202ENST00000557916 ANTXR2P58335 489 aa30.02■■■□□ 2.4
SMAD6-202ENST00000557916 C8orf34Q49A92 452 aa30.02■■■□□ 2.4
SMAD6-202ENST00000557916 C17orf99Q6UX52 265 aa30.02■■■□□ 2.4
SMAD6-202ENST00000557916 NEK1Q96PY6 1258 aa30.02■■■□□ 2.4
SMAD6-202ENST00000557916 SNX14Q9Y5W7 946 aa30.02■■■□□ 2.4
SMAD6-202ENST00000557916 IFIT3O14879 490 aaKnown RBP30.01■■■□□ 2.39
SMAD6-202ENST00000557916 MCCP23508 829 aa30.01■■■□□ 2.39
SMAD6-202ENST00000557916 MCM5P33992 734 aa30.01■■■□□ 2.39
SMAD6-202ENST00000557916 HERVK_113P62684 666 aa30.01■■■□□ 2.39
SMAD6-202ENST00000557916 ADCK5Q3MIX3 580 aa30.01■■■□□ 2.39
SMAD6-202ENST00000557916 MTMR7Q9Y216 660 aa30.01■■■□□ 2.39
SMAD6-202ENST00000557916 ERICH2A1L162 156 aa30■■■□□ 2.39
SMAD6-202ENST00000557916 GCLCP48506 637 aaPredicted RBP30■■■□□ 2.39
SMAD6-202ENST00000557916 COG2Q14746 738 aa30■■■□□ 2.39
SMAD6-202ENST00000557916 SART3Q15020 963 aaKnown RBP30■■■□□ 2.39
SMAD6-202ENST00000557916 ZNF296Q8WUU4 475 aaPredicted RBP30■■■□□ 2.39
SMAD6-202ENST00000557916 CHMP4CQ96CF2 233 aa30■■■□□ 2.39
SMAD6-202ENST00000557916 GMCL1Q96IK5 515 aa30■■■□□ 2.39
SMAD6-202ENST00000557916 KAT14Q9H8E8 782 aa30■■■□□ 2.39
SMAD6-202ENST00000557916 PRC1O43663 620 aa29.99■■■□□ 2.39
SMAD6-202ENST00000557916 FKTNO75072 461 aa29.99■■■□□ 2.39
SMAD6-202ENST00000557916 FLOT1O75955 427 aa29.99■■■□□ 2.39
SMAD6-202ENST00000557916 SEC24BO95487 1268 aa29.99■■■□□ 2.39
SMAD6-202ENST00000557916 SLC1A4P43007 532 aa29.99■■■□□ 2.39
SMAD6-202ENST00000557916 COL9A3Q14050 684 aaPredicted RBP29.99■■■□□ 2.39
SMAD6-202ENST00000557916 SEC23AQ15436 765 aa29.99■■■□□ 2.39
SMAD6-202ENST00000557916 IFIT1BQ5T764 474 aaKnown RBP29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms