RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SLC45A1Q9Y2W3 748 aa16.93■□□□□ 0.3
USP3-205ENST00000557884 E7EWF7 191 aa16.92■□□□□ 0.3
USP3-205ENST00000557884 OSBPP22059 807 aa16.92■□□□□ 0.3
USP3-205ENST00000557884 SMCR8Q8TEV9 937 aaPredicted RBP16.92■□□□□ 0.3
USP3-205ENST00000557884 KRT23Q9C075 422 aa16.92■□□□□ 0.3
USP3-205ENST00000557884 CNNM2Q9H8M5 875 aa16.92■□□□□ 0.3
USP3-205ENST00000557884 GOPCQ9HD26 462 aa16.92■□□□□ 0.3
USP3-205ENST00000557884 PNMA3Q9UL41 463 aa16.92■□□□□ 0.3
USP3-205ENST00000557884 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 TLR2O60603 784 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 TRDNQ13061 729 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 ZNF296Q8WUU4 475 aaPredicted RBP16.91■□□□□ 0.3
USP3-205ENST00000557884 NUP88Q99567 741 aaPredicted RBP16.91■□□□□ 0.3
USP3-205ENST00000557884 P2RX7Q99572 595 aaKnown RBP16.91■□□□□ 0.3
USP3-205ENST00000557884 TANGO6Q9C0B7 1094 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 ADGRA2Q96PE1 1338 aa16.91■□□□□ 0.3
USP3-205ENST00000557884 F5H6K3 240 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
USP3-205ENST00000557884 REC8O95072 547 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 NDUFB10O96000 172 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
USP3-205ENST00000557884 KLRC3Q07444 240 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 PPP4R3BQ5MIZ7 849 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
USP3-205ENST00000557884 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 CYB5R4Q7L1T6 521 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 RALYLQ86SE5 291 aaKnown RBP16.9■□□□□ 0.3
USP3-205ENST00000557884 LPAR1Q92633 364 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 MKL1Q969V6 931 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 TCP11L1Q9NUJ3 509 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 ZSWIM5Q9P217 1185 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 MYH8P13535 1937 aa16.9■□□□□ 0.3
USP3-205ENST00000557884 LAMA4Q16363 1823 aa16.89■□□□□ 0.29
USP3-205ENST00000557884 FKTNO75072 461 aa16.89■□□□□ 0.29
USP3-205ENST00000557884 FAM83BQ5T0W9 1011 aa16.89■□□□□ 0.29
USP3-205ENST00000557884 C17orf99Q6UX52 265 aa16.89■□□□□ 0.29
USP3-205ENST00000557884 IQCA1Q86XH1 822 aa16.89■□□□□ 0.29
USP3-205ENST00000557884 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.29
USP3-205ENST00000557884 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
USP3-205ENST00000557884 GREB1LQ9C091 1923 aaPredicted RBP16.89■□□□□ 0.29
USP3-205ENST00000557884 LOC285556D6RIA3 1793 aa16.89■□□□□ 0.29
USP3-205ENST00000557884 PTPRFP10586 1907 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 WDR46O15213 610 aaKnown RBP16.88■□□□□ 0.29
USP3-205ENST00000557884 PEX10O60683 326 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 HERVK_113P62684 666 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 SP3Q02447 781 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 RNF20Q5VTR2 975 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 SLFN13Q68D06 897 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 RCSD1Q6JBY9 416 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 RASGRP2Q7LDG7 609 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 ANKRD13CQ8N6S4 541 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 ZSCAN10Q96SZ4 725 aaPredicted RBP16.88■□□□□ 0.29
USP3-205ENST00000557884 TMEM47Q9BQJ4 181 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 UBAC1Q9BSL1 405 aa16.88■□□□□ 0.29
USP3-205ENST00000557884 FLOT1O75955 427 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 BCRP11274 1271 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 TOP1P11387 765 aaKnown RBP16.87■□□□□ 0.29
USP3-205ENST00000557884 NOVP48745 357 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 NT5C2P49902 561 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 NOM1Q5C9Z4 860 aaKnown RBP16.87■□□□□ 0.29
USP3-205ENST00000557884 ENAHQ8N8S7 591 aaPredicted RBP16.87■□□□□ 0.29
USP3-205ENST00000557884 GMCL1P1Q8NEA9 526 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 CD99L2Q8TCZ2 262 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 PAGR1Q9BTK6 254 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 TNKSO95271 1327 aa16.87■□□□□ 0.29
USP3-205ENST00000557884 MCCP23508 829 aa16.86■□□□□ 0.29
USP3-205ENST00000557884 COL9A3Q14050 684 aaPredicted RBP16.86■□□□□ 0.29
USP3-205ENST00000557884 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
USP3-205ENST00000557884 SYNPO2Q9UMS6 1093 aa16.86■□□□□ 0.29
USP3-205ENST00000557884 SPDYE16A6NNV3 312 aaPredicted RBP16.85■□□□□ 0.29
USP3-205ENST00000557884 ZKSCAN1P17029 563 aaPredicted RBP16.85■□□□□ 0.29
USP3-205ENST00000557884 GCLCP48506 637 aaPredicted RBP16.85■□□□□ 0.29
USP3-205ENST00000557884 ANTXR2P58335 489 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 CAP1Q01518 475 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 COG2Q14746 738 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 CCDC96Q2M329 555 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 CCDC178Q5BJE1 867 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 POTEEQ6S8J3 1075 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 TTC14Q96N46 770 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 ARHGAP39Q9C0H5 1083 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 TXNRD2Q9NNW7 524 aa16.85■□□□□ 0.29
USP3-205ENST00000557884 IFIT3O14879 490 aaKnown RBP16.84■□□□□ 0.29
USP3-205ENST00000557884 BMP3P12645 472 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 HSPA4P34932 840 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 SLC1A4P43007 532 aa16.84■□□□□ 0.29
USP3-205ENST00000557884 ADCK5Q3MIX3 580 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms