RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 IL2RBP14784 551 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 FGFR2P21802 821 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 VSNL1P62760 191 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 ANKRD20A12PQ8NF67 263 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 RASSF4Q9H2L5 321 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 ABHD10Q9NUJ1 306 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 TMOD3Q9NYL9 352 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 PNPLA7Q6ZV29 1317 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 FAM205CA6NFA0 338 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 PDE8AO60658 829 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 CCT6AP40227 531 aaKnown RBP13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 ERVK-24P63145 666 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 CASP8Q14790 479 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 KRT31Q15323 416 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 HLFQ16534 295 aa13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 NUP88Q99567 741 aaPredicted RBP13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 TRMT112Q9UI30 125 aaKnown RBP13.37□□□□□ -0.27
VIPAS39-211ENST00000557658 MYO1CO00159 1063 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 RASGRF1Q13972 1273 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 LCORLQ8N3X6 602 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 FAM71BQ8TC56 605 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 TRIM34Q9BYJ4 488 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 VPS54Q9P1Q0 977 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 FAN1Q9Y2M0 1017 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 MYH2Q9UKX2 1941 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 LRRC10BA6NIK2 292 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 ARHGAP25P42331 645 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 BRMS1Q9HCU9 246 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 MYO6Q9UM54 1294 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 ANKRD36CQ5JPF3 1778 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 BCORQ6W2J9 1755 aa13.36□□□□□ -0.27
VIPAS39-211ENST00000557658 COPB1P53618 953 aaKnown RBP13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 RRAGBQ5VZM2 374 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 SRLQ86TD4 932 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 CCDC102AQ96A19 550 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 SUGCTQ9HAC7 445 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 PRDM11Q9NQV5 511 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 RWDD2AQ9UIY3 292 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 BCL9LQ86UU0 1499 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 WDR93Q6P2C0 686 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 PYM1Q9BRP8 204 aaKnown RBP13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 VPS16Q9H269 839 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 MED4Q9NPJ6 270 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 SHANK3Q9BYB0 1731 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 TNKSO95271 1327 aa13.35□□□□□ -0.27
VIPAS39-211ENST00000557658 VGLL3A8MV65 326 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 PRPF3O43395 683 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 RPS6KA5O75582 802 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 ABL1P00519 1130 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 KRT9P35527 623 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 AMPD2Q01433 879 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 PPARAQ07869 468 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 SEC23AQ15436 765 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 PKN1Q16512 942 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 EARS2Q5JPH6 523 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 WWC2Q6AWC2 1192 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 CCDC148Q8NFR7 591 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 ESR2Q92731 530 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 SHISA4Q96DD7 197 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 SLF1Q9BQI6 1058 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 RRP15Q9Y3B9 282 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 DCCP43146 1447 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 TFRCP02786 760 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 PAK1Q13153 545 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 ZNF174Q15697 407 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 TTC38Q5R3I4 469 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 C10orf67Q8IYJ2 551 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 NOA1Q8NC60 698 aaKnown RBP13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 TAB2Q9NYJ8 693 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 LCMT1Q9UIC8 334 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 MYH13Q9UKX3 1938 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 XDHP47989 1333 aa13.34□□□□□ -0.27
VIPAS39-211ENST00000557658 KCNJ18B7U540 433 aa13.33□□□□□ -0.27
VIPAS39-211ENST00000557658 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.27
VIPAS39-211ENST00000557658 MCM3P25205 808 aa13.33□□□□□ -0.27
VIPAS39-211ENST00000557658 KCNJ12Q14500 433 aa13.33□□□□□ -0.27
VIPAS39-211ENST00000557658 TCP11X2Q5H9J9 407 aa13.33□□□□□ -0.27
VIPAS39-211ENST00000557658 STAMQ92783 540 aa13.33□□□□□ -0.27
VIPAS39-211ENST00000557658 LRP5O75197 1615 aa13.33□□□□□ -0.27
VIPAS39-211ENST00000557658 PRDM1O75626 825 aa13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 CDC25AP30304 524 aa13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 ATP2C1P98194 919 aaPredicted RBP13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 CARD10Q9BWT7 1032 aa13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 BLZF1Q9H2G9 400 aa13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 RBM28Q9NW13 759 aaKnown RBP13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 RMND1Q9NWS8 449 aa13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 EPN1Q9Y6I3 576 aaPredicted RBP13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 V9GY48 417 aaPredicted RBP13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.28
VIPAS39-211ENST00000557658 MINDY4BA8MYZ0 360 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 RNF225M0QZC1 329 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 COBLO75128 1261 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 TNNT3P45378 269 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 PTGDRQ13258 359 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 E2F4Q16254 413 aa13.32□□□□□ -0.28
VIPAS39-211ENST00000557658 NCAPH2Q6IBW4 605 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms