RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 RASA3Q14644 834 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 TMEM179Q6ZVK1 233 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 MICU3Q86XE3 530 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 CTCFLQ8NI51 663 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-212ENST00000557641 WASF1Q92558 559 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 DNAJC18Q9H819 358 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 KANSL2Q9H9L4 492 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 NCOA5Q9HCD5 579 aaKnown RBP11.94□□□□□ -0.5
GABRB3-212ENST00000557641 CABP5Q9NP86 173 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 MTMR4Q9NYA4 1195 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 PGAP2Q9UHJ9 254 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 SYNPO2Q9UMS6 1093 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 ECM29Q5VYK3 1845 aa11.94□□□□□ -0.5
GABRB3-212ENST00000557641 STK36Q9NRP7 1315 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 GLTPD2A6NH11 291 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 STX6O43752 255 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 NMT2O60551 498 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 CTDNEP1O95476 244 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 BRD1O95696 1058 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 TTLL1O95922 423 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 AKR1B1P15121 316 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 ABCB5Q2M3G0 1257 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 LARP1BQ659C4 914 aaKnown RBP11.93□□□□□ -0.5
GABRB3-212ENST00000557641 TRIM22Q8IYM9 498 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 PNMA1Q8ND90 353 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 FBXO22Q8NEZ5 403 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 NUP133Q8WUM0 1156 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 TMEM39BQ9GZU3 492 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 NYAP2Q9P242 653 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 STX8Q9UNK0 236 aa11.93□□□□□ -0.5
GABRB3-212ENST00000557641 SBF1O95248 1867 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 MPHOSPH10O00566 681 aaKnown RBP11.92□□□□□ -0.5
GABRB3-212ENST00000557641 EGFRP00533 1210 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 SYT1P21579 422 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 CDC27P30260 824 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 ADD1P35611 737 aaKnown RBP11.92□□□□□ -0.5
GABRB3-212ENST00000557641 SSRP1Q08945 709 aaKnown RBP11.92□□□□□ -0.5
GABRB3-212ENST00000557641 NBR1Q14596 966 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 NTRK3Q16288 839 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 DCAF15Q66K64 600 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 CLEC17AQ6ZS10 378 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-212ENST00000557641 ZC3H15Q8WU90 426 aaKnown RBP11.92□□□□□ -0.5
GABRB3-212ENST00000557641 MKL1Q969V6 931 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 CEP95Q96GE4 821 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 LZTS2Q9BRK4 669 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.92□□□□□ -0.5
GABRB3-212ENST00000557641 DEFB129Q9H1M3 183 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 FAM217BQ9NTX9 383 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-212ENST00000557641 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
GABRB3-212ENST00000557641 ATP6V1DQ9Y5K8 247 aa11.92□□□□□ -0.5
GABRB3-212ENST00000557641 JAK2O60674 1132 aa11.91□□□□□ -0.5
GABRB3-212ENST00000557641 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-212ENST00000557641 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
GABRB3-212ENST00000557641 GRM4Q14833 912 aa11.91□□□□□ -0.5
GABRB3-212ENST00000557641 ANGEL2Q5VTE6 544 aaKnown RBP11.91□□□□□ -0.5
GABRB3-212ENST00000557641 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
GABRB3-212ENST00000557641 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
GABRB3-212ENST00000557641 TEPSINQ96N21 525 aa11.91□□□□□ -0.5
GABRB3-212ENST00000557641 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
GABRB3-212ENST00000557641 MYL10Q9BUA6 226 aa11.91□□□□□ -0.5
GABRB3-212ENST00000557641 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-212ENST00000557641 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-212ENST00000557641 ZSCAN22P10073 491 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-212ENST00000557641 RXRAP19793 462 aa11.9□□□□□ -0.5
GABRB3-212ENST00000557641 HIRAP54198 1017 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-212ENST00000557641 AKAP17AQ02040 695 aaKnown RBP11.9□□□□□ -0.5
GABRB3-212ENST00000557641 SUPT20HL1Q3ZLR7 823 aa11.9□□□□□ -0.5
GABRB3-212ENST00000557641 LHX8Q68G74 356 aa11.9□□□□□ -0.5
GABRB3-212ENST00000557641 TMTC3Q6ZXV5 915 aa11.9□□□□□ -0.5
GABRB3-212ENST00000557641 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.5
GABRB3-212ENST00000557641 DCPSQ96C86 337 aaKnown RBP11.9□□□□□ -0.5
GABRB3-212ENST00000557641 DDX11Q96FC9 970 aa11.9□□□□□ -0.5
GABRB3-212ENST00000557641 GGA3Q9NZ52 723 aa11.9□□□□□ -0.5
GABRB3-212ENST00000557641 CLIP2Q9UDT6 1046 aa11.9□□□□□ -0.5
GABRB3-212ENST00000557641 H3BQV1 296 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 PRPF3O43395 683 aaKnown RBP11.89□□□□□ -0.51
GABRB3-212ENST00000557641 DEXIO95424 95 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 ASNSP08243 561 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 FDPSP14324 419 aaKnown RBP11.89□□□□□ -0.51
GABRB3-212ENST00000557641 XBP1P17861 261 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 CAP2P40123 477 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 ICA1Q05084 483 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 PNMA8AQ86V59 439 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-212ENST00000557641 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-212ENST00000557641 TNPO1Q92973 898 aaKnown RBP11.89□□□□□ -0.51
GABRB3-212ENST00000557641 ZNF341Q9BYN7 854 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 SH2D4AQ9H788 454 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 MTMR6Q9Y217 621 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 ZDHHC9Q9Y397 364 aa11.89□□□□□ -0.51
GABRB3-212ENST00000557641 PALM3A6NDB9 673 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-212ENST00000557641 FAM196BA6NMK8 535 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms