RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 BEGAINQ9BUH8 593 aa13.36□□□□□ -0.27
APEX1-220ENST00000557592 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
APEX1-220ENST00000557592 AGTPBP1Q9UPW5 1226 aa13.36□□□□□ -0.27
APEX1-220ENST00000557592 TNKSO95271 1327 aa13.36□□□□□ -0.27
APEX1-220ENST00000557592 PDHXO00330 501 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 IFIT3O14879 490 aaKnown RBP13.35□□□□□ -0.27
APEX1-220ENST00000557592 PRC1O43663 620 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 MCM5P33992 734 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
APEX1-220ENST00000557592 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 TREML2Q5T2D2 321 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 GPAT2Q6NUI2 795 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 JMYQ8N9B5 988 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 MKL1Q969V6 931 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 C12orf42Q96LP6 360 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
APEX1-220ENST00000557592 NEK1Q96PY6 1258 aa13.35□□□□□ -0.27
APEX1-220ENST00000557592 ERICH2A1L162 156 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 TRPA1O75762 1119 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 TOP1P11387 765 aaKnown RBP13.34□□□□□ -0.27
APEX1-220ENST00000557592 VCAM1P19320 739 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 ANTXR2P58335 489 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 COL9A3Q14050 684 aaPredicted RBP13.34□□□□□ -0.27
APEX1-220ENST00000557592 RCSD1Q6JBY9 416 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 DGKHQ86XP1 1220 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 ENAHQ8N8S7 591 aaPredicted RBP13.34□□□□□ -0.27
APEX1-220ENST00000557592 LPAR1Q92633 364 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 CHMP4CQ96CF2 233 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 TTC14Q96N46 770 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 SYNPO2Q9UMS6 1093 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
APEX1-220ENST00000557592 F5H6K3 240 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 NDUFB10O96000 172 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 HMGB1P09429 215 aaKnown RBP13.33□□□□□ -0.28
APEX1-220ENST00000557592 CPA1P15085 419 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 NOVP48745 357 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 KLRC3Q07444 240 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 PABPC4Q13310 644 aaKnown RBP eCLIP13.33□□□□□ -0.28
APEX1-220ENST00000557592 TAF1CQ15572 869 aaPredicted RBP13.33□□□□□ -0.28
APEX1-220ENST00000557592 TMEM67Q5HYA8 995 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 IFIT1BQ5T764 474 aaKnown RBP13.33□□□□□ -0.28
APEX1-220ENST00000557592 GMCL1P1Q8NEA9 526 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 TANGO6Q9C0B7 1094 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 RPAP3Q9H6T3 665 aaPredicted RBP13.33□□□□□ -0.28
APEX1-220ENST00000557592 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 ZCCHC17Q9NP64 241 aaKnown RBP13.33□□□□□ -0.28
APEX1-220ENST00000557592 WBP1LQ9NX94 342 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 ISY1Q9ULR0 285 aaKnown RBP13.33□□□□□ -0.28
APEX1-220ENST00000557592 SLC45A1Q9Y2W3 748 aa13.33□□□□□ -0.28
APEX1-220ENST00000557592 USP17L15C9J2P7 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 USP17L13C9JLJ4 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 USP17L11C9JVI0 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 USP17L18D6R9N7 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 USP17L22D6RA61 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 USP17L17D6RBQ6 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 USP17L19D6RCP7 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 USP17L20D6RJB6 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 WDR46O15213 610 aaKnown RBP13.32□□□□□ -0.28
APEX1-220ENST00000557592 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
APEX1-220ENST00000557592 PSMA5P28066 241 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 IRX3P78415 501 aaPredicted RBP13.32□□□□□ -0.28
APEX1-220ENST00000557592 USP17L24Q0WX57 530 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 WTAPQ15007 396 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 SEC23AQ15436 765 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 FAM83BQ5T0W9 1011 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 SLFN13Q68D06 897 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 BLOC1S2Q6QNY1 142 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 DHX32Q7L7V1 743 aaKnown RBP13.32□□□□□ -0.28
APEX1-220ENST00000557592 TMEM87BQ96K49 555 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 TCEANC2Q96MN5 208 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 PARK7Q99497 189 aaKnown RBP13.32□□□□□ -0.28
APEX1-220ENST00000557592 NUP88Q99567 741 aaPredicted RBP13.32□□□□□ -0.28
APEX1-220ENST00000557592 LRRC2Q9BYS8 371 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 ASCC2Q9H1I8 757 aaPredicted RBP13.32□□□□□ -0.28
APEX1-220ENST00000557592 UPF2Q9HAU5 1272 aaKnown RBP13.32□□□□□ -0.28
APEX1-220ENST00000557592 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
APEX1-220ENST00000557592 CA12O43570 354 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 TBC1D8O95759 1140 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 CYP2C8P10632 490 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 OSBPP22059 807 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 HOXA7P31268 230 aaPredicted RBP13.31□□□□□ -0.28
APEX1-220ENST00000557592 ANAPC15P60006 121 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 CRHR2Q13324 411 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 PNMA1Q8ND90 353 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 IGDCC4Q8TDY8 1250 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 ANKS1AQ92625 1134 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 GMCL1Q96IK5 515 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 ZFYVE28Q9HCC9 887 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
APEX1-220ENST00000557592 SAGE1Q9NXZ1 904 aa13.31□□□□□ -0.28
APEX1-220ENST00000557592 SH2B2O14492 632 aaPredicted RBP13.3□□□□□ -0.28
APEX1-220ENST00000557592 BMP3P12645 472 aa13.3□□□□□ -0.28
APEX1-220ENST00000557592 SLC1A4P43007 532 aa13.3□□□□□ -0.28
APEX1-220ENST00000557592 FGD1P98174 961 aa13.3□□□□□ -0.28
APEX1-220ENST00000557592 EXOSC10Q01780 885 aaKnown RBP13.3□□□□□ -0.28
APEX1-220ENST00000557592 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms