RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 STK35Q8TDR2 534 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 DDX17Q92841 729 aaKnown RBP6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 POP1Q99575 1024 aaKnown RBP6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 NOP53Q9NZM5 478 aaKnown RBP6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 PCDHB14Q9Y5E9 798 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 NLRP1Q9C000 1473 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 MLH3Q9UHC1 1453 aa6.71□□□□□ -1.34
MTHFD1-216ENST00000557539 PLEKHD1A6NEE1 506 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 B2RBV5 119 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 ZBTB42B2RXF5 422 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 GPLD1P80108 840 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 NEUROD1Q13562 356 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 PLEKHG6Q3KR16 790 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 TKFCQ3LXA3 575 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 CEP135Q66GS9 1140 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 RUFY4Q6ZNE9 571 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 THAP3Q8WTV1 239 aaPredicted RBP6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 BSNDQ8WZ55 320 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 FEZ1Q99689 392 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 RBSNQ9H1K0 784 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 TMX1Q9H3N1 280 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 DDX56Q9NY93 547 aaKnown RBP6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 KDM2BQ8NHM5 1336 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 NUP188Q5SRE5 1749 aa6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 TNS1Q9HBL0 1735 aaKnown RBP6.7□□□□□ -1.34
MTHFD1-216ENST00000557539 MAP3K5Q99683 1374 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 M0R082 166 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 DIAPH1O60610 1272 aaKnown RBP6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 SMNDC1O75940 238 aaKnown RBP eCLIP6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 PARNO95453 639 aaKnown RBP6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 B3GALT4O96024 378 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 ALBP02768 609 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 YBX3P16989 372 aaKnown RBP eCLIP6.69□□□□□ -1.343e-7■□□□□ 10.1
MTHFD1-216ENST00000557539 ALAS2P22557 587 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 ARNTP27540 789 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 MASP1P48740 699 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 LBX1P52954 281 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 CASP7P55210 303 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 ZNF423Q2M1K9 1284 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 SPATC1Q76KD6 591 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 MICALL1Q8N3F8 863 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 RBBP8NLQ8NC74 664 aaPredicted RBP6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 ZNF417Q8TAU3 575 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 ZNF587Q96SQ5 575 aaPredicted RBP6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 ADGRB2O60241 1585 aa6.69□□□□□ -1.34
MTHFD1-216ENST00000557539 MIA2Q96PC5 1412 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 NKTRP30414 1462 aaKnown RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 EFCAB6Q5THR3 1501 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 HCLS1P14317 486 aaPredicted RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 EIF2AK2P19525 551 aaKnown RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 ADH7P40394 386 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 PTPN11Q06124 597 aaPredicted RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 SSRP1Q08945 709 aaKnown RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 C6orf15Q6UXA7 325 aaPredicted RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 C20orf204Q6ZNR8 217 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 STAG1Q8WVM7 1258 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 GAL3ST3Q96A11 431 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 EMILIN2Q9BXX0 1053 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 UBE2OQ9C0C9 1292 aaKnown RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 IRF2BPLQ9H1B7 796 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 EHMT1Q9H9B1 1298 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 PRDM6Q9NQX0 595 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 G3BP2Q9UN86 482 aaKnown RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 POLR3KQ9Y2Y1 108 aaPredicted RBP6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 PPME1Q9Y570 386 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 PTCH2Q9Y6C5 1203 aa6.68□□□□□ -1.34
MTHFD1-216ENST00000557539 FMN1Q68DA7 1419 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 A0A1W2PQH9 124 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 ASMTLO95671 621 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 S100BP04271 92 aaPredicted RBP6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 NID1P14543 1247 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 FXR1P51114 621 aaKnown RBP eCLIP6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 RPL6Q02878 288 aaKnown RBP6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 FSTL1Q12841 308 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 TCEA2Q15560 299 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 MPRIPQ6WCQ1 1025 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 FAM178BQ8IXR5 827 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 SLC26A8Q96RN1 970 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 ANTXR1Q9H6X2 564 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 DNAJB12Q9NXW2 375 aaKnown RBP6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 MROH1Q8NDA8 1641 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 RREB1Q92766 1687 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 SZT2Q5T011 3432 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 CARMIL1Q5VZK9 1371 aa6.67□□□□□ -1.34
MTHFD1-216ENST00000557539 ASXL1Q8IXJ9 1541 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 SPATA31C1P0DKV0 1188 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 ITGB7P26010 798 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 CCDC181Q5TID7 509 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 MAP1SQ66K74 1059 aaPredicted RBP6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 VN1R5Q7Z5H4 357 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 TTC6Q86TZ1 520 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 C19orf47Q8N9M1 422 aaKnown RBP6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 CHPF2Q9P2E5 772 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 ZMYM5Q9UJ78 669 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 SOX13Q9UN79 622 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 EID1Q9Y6B2 187 aa6.66□□□□□ -1.34
MTHFD1-216ENST00000557539 CASZ1Q86V15 1759 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms