RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CLEC10AQ8IUN9 316 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 ANKRD13CQ8N6S4 541 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 NEDD1Q8NHV4 660 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 P2RX7Q99572 595 aaKnown RBP14.81□□□□□ -0.04
SLIRP-209ENST00000557342 RPAP3Q9H6T3 665 aaPredicted RBP14.81□□□□□ -0.04
SLIRP-209ENST00000557342 CTNNA3Q9UI47 895 aa14.81□□□□□ -0.04
SLIRP-209ENST00000557342 IGKV6D-41A0A0C4DH26 115 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 TSPY2A6NKD2 308 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 ZNF213O14771 459 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 WDR46O15213 610 aaKnown RBP14.8□□□□□ -0.04
SLIRP-209ENST00000557342 FMNL1O95466 1100 aaPredicted RBP14.8□□□□□ -0.04
SLIRP-209ENST00000557342 FGRP09769 529 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 ARHGAP39Q9C0H5 1083 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 RNF41Q9H4P4 317 aaPredicted RBP14.8□□□□□ -0.04
SLIRP-209ENST00000557342 PPP4R2Q9NY27 417 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 MORF4L1Q9UBU8 362 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 SYNPO2Q9UMS6 1093 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 PTPN22Q9Y2R2 807 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 RLFQ13129 1914 aa14.8□□□□□ -0.04
SLIRP-209ENST00000557342 RANBP6O60518 1105 aaKnown RBP14.79□□□□□ -0.04
SLIRP-209ENST00000557342 TTLL1O95922 423 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 NT5C2P49902 561 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 HAND2P61296 217 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 IMMTQ16891 758 aaKnown RBP14.79□□□□□ -0.04
SLIRP-209ENST00000557342 BMP2KLQ5H9B9 411 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 FAM47AQ5JRC9 791 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 AKNAD1Q5T1N1 836 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 MFSD6Q6ZSS7 791 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 DOCK3Q8IZD9 2030 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 MKL1Q969V6 931 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 CEP95Q96GE4 821 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 TANGO6Q9C0B7 1094 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 TOMM22Q9NS69 142 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 MTMR4Q9NYA4 1195 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 HOXC10Q9NYD6 342 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 CLIP2Q9UDT6 1046 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 HPS5Q9UPZ3 1129 aa14.79□□□□□ -0.04
SLIRP-209ENST00000557342 CAP1Q01518 475 aa14.78□□□□□ -0.04
SLIRP-209ENST00000557342 COG2Q14746 738 aa14.78□□□□□ -0.04
SLIRP-209ENST00000557342 LBX2Q6XYB7 198 aa14.78□□□□□ -0.04
SLIRP-209ENST00000557342 GPRC5AQ8NFJ5 357 aa14.78□□□□□ -0.04
SLIRP-209ENST00000557342 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
SLIRP-209ENST00000557342 TRIM47Q96LD4 638 aa14.78□□□□□ -0.04
SLIRP-209ENST00000557342 RABGAP1Q9Y3P9 1069 aa14.78□□□□□ -0.04
SLIRP-209ENST00000557342 COL11A1P12107 1806 aaPredicted RBP14.78□□□□□ -0.04
SLIRP-209ENST00000557342 A0A0G2JMZ2 1700 aa14.78□□□□□ -0.04
SLIRP-209ENST00000557342 MYPNQ86TC9 1320 aa14.77□□□□□ -0.04
SLIRP-209ENST00000557342 TNPO2O14787 897 aaKnown RBP14.77□□□□□ -0.05
SLIRP-209ENST00000557342 SGSM2O43147 1006 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 RAD21O60216 631 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 CTGFP29279 349 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.05
SLIRP-209ENST00000557342 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 COA7Q96BR5 231 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 INCENPQ9NQS7 918 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 RBPJLQ9UBG7 517 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 SRRDQ9UH36 339 aa14.77□□□□□ -0.05
SLIRP-209ENST00000557342 CCDC85CA6NKD9 419 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-209ENST00000557342 F5H6K3 240 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 FLOT1O75955 427 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 ECM2O94769 699 aaPredicted RBP14.76□□□□□ -0.05
SLIRP-209ENST00000557342 ERVK-9P63128 1117 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 ERVK-24P63145 666 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 CCNA1P78396 465 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 KLRC3Q07444 240 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 CCAR1Q8IX12 1150 aaKnown RBP14.76□□□□□ -0.05
SLIRP-209ENST00000557342 ESR2Q92731 530 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 PAGR1Q9BTK6 254 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 IL25Q9H293 177 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 TCP11L1Q9NUJ3 509 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 TACC3Q9Y6A5 838 aa14.76□□□□□ -0.05
SLIRP-209ENST00000557342 MAPK4P31152 587 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 DSG3P32926 999 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 CASC1Q6TDU7 716 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 KIAA1211Q6ZU35 1233 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 NBPF11Q86T75 865 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 SKAP1Q86WV1 359 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 TBC1D10CQ8IV04 446 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 MB21D1Q8N884 522 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 GMCL1P1Q8NEA9 526 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 RAET1EQ8TD07 263 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 NBPF3Q9H094 633 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 TXNRD2Q9NNW7 524 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 STX8Q9UNK0 236 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 PTCH2Q9Y6C5 1203 aa14.75□□□□□ -0.05
SLIRP-209ENST00000557342 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
SLIRP-209ENST00000557342 PLXNB2O15031 1838 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 NDUFB10O96000 172 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 NOVP48745 357 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 SLC9C1Q4G0N8 1177 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 CCDC178Q5BJE1 867 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 FAM83BQ5T0W9 1011 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 LRRC47Q8N1G4 583 aaKnown RBP14.74□□□□□ -0.05
SLIRP-209ENST00000557342 KRT23Q9C075 422 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 CNNM2Q9H8M5 875 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 IL17RBQ9NRM6 502 aa14.74□□□□□ -0.05
SLIRP-209ENST00000557342 CNMDO75829 334 aa14.73□□□□□ -0.05
SLIRP-209ENST00000557342 PTH1RQ03431 593 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms