RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 CCNA1P78396 465 aa27.14■■□□□ 1.94
TMEM260-214ENST00000556975 GPR142Q7Z601 462 aa27.14■■□□□ 1.94
TMEM260-214ENST00000556975 CCAR1Q8IX12 1150 aaKnown RBP27.14■■□□□ 1.94
TMEM260-214ENST00000556975 U2AF1L4Q8WU68 220 aaKnown RBP27.14■■□□□ 1.94
TMEM260-214ENST00000556975 USP6NLQ92738 828 aa27.14■■□□□ 1.94
TMEM260-214ENST00000556975 FSD1Q9BTV5 496 aa27.14■■□□□ 1.94
TMEM260-214ENST00000556975 KANSL2Q9H9L4 492 aa27.14■■□□□ 1.94
TMEM260-214ENST00000556975 PAK6Q9NQU5 681 aaPredicted RBP27.14■■□□□ 1.94
TMEM260-214ENST00000556975 ROBO3Q96MS0 1386 aa27.13■■□□□ 1.93
TMEM260-214ENST00000556975 KIAA1755Q5JYT7 1200 aa27.13■■□□□ 1.93
TMEM260-214ENST00000556975 ZMYM1Q5SVZ6 1142 aa27.13■■□□□ 1.93
TMEM260-214ENST00000556975 PLEKHH3Q7Z736 793 aa27.13■■□□□ 1.93
TMEM260-214ENST00000556975 UBE2Q1Q7Z7E8 422 aa27.13■■□□□ 1.93
TMEM260-214ENST00000556975 VCPKMTQ9H867 229 aa27.13■■□□□ 1.93
TMEM260-214ENST00000556975 EPB41L4AQ9HCS5 686 aaPredicted RBP27.13■■□□□ 1.93
TMEM260-214ENST00000556975 BTBD7Q9P203 1132 aa27.13■■□□□ 1.93
TMEM260-214ENST00000556975 CYP2B6P20813 491 aa27.12■■□□□ 1.93
TMEM260-214ENST00000556975 MORN1Q5T089 497 aa27.12■■□□□ 1.93
TMEM260-214ENST00000556975 CLEC10AQ8IUN9 316 aa27.12■■□□□ 1.93
TMEM260-214ENST00000556975 MINDY4BA8MYZ0 360 aa27.11■■□□□ 1.93
TMEM260-214ENST00000556975 EEF2P13639 858 aaKnown RBP27.11■■□□□ 1.93
TMEM260-214ENST00000556975 PDE1AP54750 535 aa27.11■■□□□ 1.93
TMEM260-214ENST00000556975 TRMT44Q8IYL2 757 aaKnown RBP27.11■■□□□ 1.93
TMEM260-214ENST00000556975 IFNL3Q8IZI9 196 aa27.11■■□□□ 1.93
TMEM260-214ENST00000556975 SEC62Q99442 399 aaKnown RBP27.11■■□□□ 1.93
TMEM260-214ENST00000556975 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.11■■□□□ 1.93
TMEM260-214ENST00000556975 RLFQ13129 1914 aa27.1■■□□□ 1.93
TMEM260-214ENST00000556975 RASA1P20936 1047 aa27.1■■□□□ 1.93
TMEM260-214ENST00000556975 SMC5Q8IY18 1101 aa27.1■■□□□ 1.93
TMEM260-214ENST00000556975 TRIB2Q92519 343 aa27.1■■□□□ 1.93
TMEM260-214ENST00000556975 RWDD1Q9H446 243 aaPredicted RBP27.1■■□□□ 1.93
TMEM260-214ENST00000556975 MKNK2Q9HBH9 465 aa27.1■■□□□ 1.93
TMEM260-214ENST00000556975 TRIOBPQ9H2D6 2365 aa27.1■■□□□ 1.93
TMEM260-214ENST00000556975 WDR46O15213 610 aaKnown RBP27.09■■□□□ 1.93
TMEM260-214ENST00000556975 APPP05067 770 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 RGS2P41220 211 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 TDO2P48775 406 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 EVI5LQ96CN4 794 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 DEFB118Q96PH6 123 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 NACAP1Q9BZK3 213 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 TANGO6Q9C0B7 1094 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 CRISPLD2Q9H0B8 497 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.09■■□□□ 1.93
TMEM260-214ENST00000556975 RPTORQ8N122 1335 aa27.09■■□□□ 1.93
TMEM260-214ENST00000556975 GREB1LQ9C091 1923 aaPredicted RBP27.08■■□□□ 1.93
TMEM260-214ENST00000556975 DSG3P32926 999 aa27.08■■□□□ 1.93
TMEM260-214ENST00000556975 MAP3K21Q5TCX8 1036 aa27.08■■□□□ 1.93
TMEM260-214ENST00000556975 TICAM2Q86XR7 235 aa27.08■■□□□ 1.93
TMEM260-214ENST00000556975 MB21D1Q8N884 522 aa27.08■■□□□ 1.93
TMEM260-214ENST00000556975 ZNF287Q9HBT7 754 aa27.08■■□□□ 1.93
TMEM260-214ENST00000556975 HMX1Q9NP08 348 aaPredicted RBP27.08■■□□□ 1.93
TMEM260-214ENST00000556975 PTPREP23469 700 aa27.07■■□□□ 1.92
TMEM260-214ENST00000556975 TRIM32Q13049 653 aa27.07■■□□□ 1.92
TMEM260-214ENST00000556975 MAP2K5Q13163 448 aa27.07■■□□□ 1.92
TMEM260-214ENST00000556975 HABP4Q5JVS0 413 aaKnown RBP27.07■■□□□ 1.92
TMEM260-214ENST00000556975 SPICE1Q8N0Z3 855 aa27.07■■□□□ 1.92
TMEM260-214ENST00000556975 SLC15A5A6NIM6 579 aa27.06■■□□□ 1.92
TMEM260-214ENST00000556975 APBA2Q99767 749 aa27.06■■□□□ 1.92
TMEM260-214ENST00000556975 CWC22Q9HCG8 908 aaKnown RBP27.06■■□□□ 1.92
TMEM260-214ENST00000556975 NYAP2Q9P242 653 aa27.06■■□□□ 1.92
TMEM260-214ENST00000556975 FLOT1O75955 427 aa27.05■■□□□ 1.92
TMEM260-214ENST00000556975 TFRCP02786 760 aaKnown RBP27.05■■□□□ 1.92
TMEM260-214ENST00000556975 ATP2B2Q01814 1243 aa27.05■■□□□ 1.92
TMEM260-214ENST00000556975 STK11IPQ8N1F8 1099 aa27.05■■□□□ 1.92
TMEM260-214ENST00000556975 SHCBP1Q8NEM2 672 aa27.05■■□□□ 1.92
TMEM260-214ENST00000556975 EXOC6Q8TAG9 804 aa27.05■■□□□ 1.92
TMEM260-214ENST00000556975 GOPCQ9HD26 462 aa27.05■■□□□ 1.92
TMEM260-214ENST00000556975 ADAMTS5Q9UNA0 930 aa27.05■■□□□ 1.92
TMEM260-214ENST00000556975 A0A0G2JMZ2 1700 aa27.04■■□□□ 1.92
TMEM260-214ENST00000556975 FARP2O94887 1054 aaPredicted RBP27.04■■□□□ 1.92
TMEM260-214ENST00000556975 ZKSCAN1P17029 563 aaPredicted RBP27.04■■□□□ 1.92
TMEM260-214ENST00000556975 GRB14Q14449 540 aa27.04■■□□□ 1.92
TMEM260-214ENST00000556975 ZNF444Q8N0Y2 327 aaPredicted RBP27.04■■□□□ 1.92
TMEM260-214ENST00000556975 MOV10L1Q9BXT6 1211 aaKnown RBP27.04■■□□□ 1.92
TMEM260-214ENST00000556975 LNPKQ9C0E8 428 aa27.04■■□□□ 1.92
TMEM260-214ENST00000556975 SPATC1LQ9H0A9 340 aa27.04■■□□□ 1.92
TMEM260-214ENST00000556975 NAPBQ9H115 298 aa27.04■■□□□ 1.92
TMEM260-214ENST00000556975 IGKV6D-41A0A0C4DH26 115 aa27.03■■□□□ 1.92
TMEM260-214ENST00000556975 IGHDP01880 384 aa27.03■■□□□ 1.92
TMEM260-214ENST00000556975 HOXC6P09630 235 aa27.03■■□□□ 1.92
TMEM260-214ENST00000556975 IVNS1ABPQ9Y6Y0 642 aa27.03■■□□□ 1.92
TMEM260-214ENST00000556975 PARP14Q460N5 1801 aa27.02■■□□□ 1.92
TMEM260-214ENST00000556975 STRNO43815 780 aa27.02■■□□□ 1.92
TMEM260-214ENST00000556975 PRKAR2AP13861 404 aaKnown RBP27.02■■□□□ 1.92
TMEM260-214ENST00000556975 CCL14Q16627 93 aa27.02■■□□□ 1.92
TMEM260-214ENST00000556975 WDR78Q5VTH9 848 aa27.02■■□□□ 1.92
TMEM260-214ENST00000556975 ATG4CQ96DT6 458 aa27.02■■□□□ 1.92
TMEM260-214ENST00000556975 HTATIP2Q9BUP3 242 aa27.02■■□□□ 1.92
TMEM260-214ENST00000556975 HELLSQ9NRZ9 838 aa27.02■■□□□ 1.92
TMEM260-214ENST00000556975 FOXP2O15409 715 aa27.01■■□□□ 1.91
TMEM260-214ENST00000556975 PDE4BQ07343 736 aa27.01■■□□□ 1.91
TMEM260-214ENST00000556975 CACNB2Q08289 660 aaPredicted RBP27.01■■□□□ 1.91
TMEM260-214ENST00000556975 ANKLE1Q8NAG6 615 aa27.01■■□□□ 1.91
TMEM260-214ENST00000556975 MKL1Q969V6 931 aa27.01■■□□□ 1.91
TMEM260-214ENST00000556975 PRDM1O75626 825 aa27■■□□□ 1.91
TMEM260-214ENST00000556975 SLC3A2P08195 630 aaKnown RBP27■■□□□ 1.91
TMEM260-214ENST00000556975 PPARAQ07869 468 aa27■■□□□ 1.91
TMEM260-214ENST00000556975 CCDC129Q6ZRS4 1044 aa27■■□□□ 1.91
TMEM260-214ENST00000556975 CHD1LQ86WJ1 897 aa27■■□□□ 1.91
TMEM260-214ENST00000556975 MROH8Q9H579 483 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms