RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 JARID2Q92833 1246 aaPredicted RBP7.1□□□□□ -1.27
PRPF39-210ENST00000556718 SGPP1Q9BX95 441 aa7.1□□□□□ -1.27
PRPF39-210ENST00000556718 SLC6A17Q9H1V8 727 aa7.1□□□□□ -1.27
PRPF39-210ENST00000556718 GCM1Q9NP62 436 aa7.1□□□□□ -1.27
PRPF39-210ENST00000556718 PARD6AQ9NPB6 346 aa7.1□□□□□ -1.27
PRPF39-210ENST00000556718 BMP7P18075 431 aa7.09□□□□□ -1.27
PRPF39-210ENST00000556718 LTKP29376 864 aa7.09□□□□□ -1.27
PRPF39-210ENST00000556718 RPL6Q02878 288 aaKnown RBP7.09□□□□□ -1.27
PRPF39-210ENST00000556718 PDE4BQ07343 736 aa7.09□□□□□ -1.27
PRPF39-210ENST00000556718 MEI1Q5TIA1 1274 aa7.09□□□□□ -1.27
PRPF39-210ENST00000556718 OXR1Q8N573 874 aa7.09□□□□□ -1.27
PRPF39-210ENST00000556718 BAHD1Q8TBE0 780 aaPredicted RBP7.09□□□□□ -1.27
PRPF39-210ENST00000556718 INTS4Q96HW7 963 aaKnown RBP7.09□□□□□ -1.27
PRPF39-210ENST00000556718 FRMD6Q96NE9 622 aa7.09□□□□□ -1.27
PRPF39-210ENST00000556718 ADAM30Q9UKF2 790 aa7.09□□□□□ -1.27
PRPF39-210ENST00000556718 TLR6Q9Y2C9 796 aa7.09□□□□□ -1.27
PRPF39-210ENST00000556718 YBX2Q9Y2T7 364 aaKnown RBP7.09□□□□□ -1.27
PRPF39-210ENST00000556718 FITM1A5D6W6 292 aa7.08□□□□□ -1.28
PRPF39-210ENST00000556718 TSNAXIP1Q2TAA8 658 aa7.08□□□□□ -1.28
PRPF39-210ENST00000556718 CYB5D2Q8WUJ1 264 aa7.08□□□□□ -1.28
PRPF39-210ENST00000556718 ZNF428Q96B54 188 aa7.08□□□□□ -1.28
PRPF39-210ENST00000556718 ZNF552Q9H707 407 aaPredicted RBP7.08□□□□□ -1.28
PRPF39-210ENST00000556718 A0A0G2JLL6 359 aaPredicted RBP7.07□□□□□ -1.28
PRPF39-210ENST00000556718 PSPNO60542 156 aa7.07□□□□□ -1.28
PRPF39-210ENST00000556718 EFEMP2O95967 443 aa7.07□□□□□ -1.28
PRPF39-210ENST00000556718 NR0B2Q15466 257 aa7.07□□□□□ -1.28
PRPF39-210ENST00000556718 FAM13CQ8NE31 585 aa7.07□□□□□ -1.28
PRPF39-210ENST00000556718 RELTQ969Z4 430 aa7.07□□□□□ -1.28
PRPF39-210ENST00000556718 SHISA4Q96DD7 197 aa7.07□□□□□ -1.28
PRPF39-210ENST00000556718 CWC22Q9HCG8 908 aaKnown RBP7.07□□□□□ -1.28
PRPF39-210ENST00000556718 GPR160Q9UJ42 338 aa7.07□□□□□ -1.28
PRPF39-210ENST00000556718 AK5Q9Y6K8 562 aa7.07□□□□□ -1.28
PRPF39-210ENST00000556718 SHISA3A0PJX4 238 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 PEX10O60683 326 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 SEMA7AO75326 666 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 PLCG1P19174 1290 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 PDE6BP35913 854 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 SSPNQ14714 243 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 TMEM132EQ6IEE7 984 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 ZCCHC4Q9H5U6 513 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 KCNH3Q9ULD8 1083 aa7.06□□□□□ -1.28
PRPF39-210ENST00000556718 CNOT6Q9ULM6 557 aaKnown RBP7.06□□□□□ -1.28
PRPF39-210ENST00000556718 TEX51A0A1B0GUA7 166 aa7.05□□□□□ -1.28
PRPF39-210ENST00000556718 TEKQ02763 1124 aa7.05□□□□□ -1.28
PRPF39-210ENST00000556718 RNF141Q8WVD5 230 aa7.05□□□□□ -1.28
PRPF39-210ENST00000556718 DHX38Q92620 1227 aaKnown RBP7.05□□□□□ -1.28
PRPF39-210ENST00000556718 KCNC2Q96PR1 638 aa7.05□□□□□ -1.28
PRPF39-210ENST00000556718 KCTD3Q9Y597 815 aa7.05□□□□□ -1.28
PRPF39-210ENST00000556718 RBM47A0AV96 593 aaKnown RBP7.04□□□□□ -1.28
PRPF39-210ENST00000556718 NOTOA8MTQ0 251 aa7.04□□□□□ -1.28
PRPF39-210ENST00000556718 F6X3S4 739 aa7.04□□□□□ -1.28
PRPF39-210ENST00000556718 PRPF40AO75400 957 aaKnown RBP7.04□□□□□ -1.28
PRPF39-210ENST00000556718 BNC2Q6ZN30 1099 aaPredicted RBP7.04□□□□□ -1.28
PRPF39-210ENST00000556718 SIRT2Q8IXJ6 389 aa7.04□□□□□ -1.28
PRPF39-210ENST00000556718 DUSP9Q99956 384 aaKnown RBP7.04□□□□□ -1.28
PRPF39-210ENST00000556718 G6PC3Q9BUM1 346 aa7.04□□□□□ -1.28
PRPF39-210ENST00000556718 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
PRPF39-210ENST00000556718 TRIM13O60858 407 aa7.03□□□□□ -1.28
PRPF39-210ENST00000556718 DNAJC14Q6Y2X3 702 aaPredicted RBP7.03□□□□□ -1.28
PRPF39-210ENST00000556718 SPPL2CQ8IUH8 684 aa7.03□□□□□ -1.28
PRPF39-210ENST00000556718 PHC3Q8NDX5 983 aa7.03□□□□□ -1.28
PRPF39-210ENST00000556718 PANK1Q8TE04 598 aa7.03□□□□□ -1.28
PRPF39-210ENST00000556718 LINC01599Q8WXQ3 324 aa7.03□□□□□ -1.28
PRPF39-210ENST00000556718 KREMEN1Q96MU8 473 aa7.03□□□□□ -1.28
PRPF39-210ENST00000556718 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
PRPF39-210ENST00000556718 ZNF281Q9Y2X9 895 aa7.03□□□□□ -1.28
PRPF39-210ENST00000556718 CHURC1-FNTBB4DL54 471 aa7.02□□□□□ -1.29
PRPF39-210ENST00000556718 FOXD2O60548 495 aaPredicted RBP7.02□□□□□ -1.29
PRPF39-210ENST00000556718 YARSP54577 528 aaKnown RBP7.02□□□□□ -1.29
PRPF39-210ENST00000556718 TMEM201Q5SNT2 666 aa7.02□□□□□ -1.29
PRPF39-210ENST00000556718 MARCH10Q8NA82 808 aaPredicted RBP7.02□□□□□ -1.29
PRPF39-210ENST00000556718 CILPO75339 1184 aa7.01□□□□□ -1.29
PRPF39-210ENST00000556718 TNNI2P48788 182 aa7.01□□□□□ -1.29
PRPF39-210ENST00000556718 CHRNEQ04844 493 aa7.01□□□□□ -1.29
PRPF39-210ENST00000556718 SNX17Q15036 470 aa7.01□□□□□ -1.29
PRPF39-210ENST00000556718 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
PRPF39-210ENST00000556718 TCERG1LQ5VWI1 586 aa7.01□□□□□ -1.29
PRPF39-210ENST00000556718 ANKS4BQ8N8V4 417 aa7.01□□□□□ -1.29
PRPF39-210ENST00000556718 JAG2Q9Y219 1238 aa7.01□□□□□ -1.29
PRPF39-210ENST00000556718 ADAMTS20P59510 1910 aa7.01□□□□□ -1.29
PRPF39-210ENST00000556718 FAM221AA4D161 298 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 ANKRD33BA6NCL7 494 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 DNAJA2O60884 412 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 PI3P19957 117 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 DUSP4Q13115 394 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 ZNF385BQ569K4 471 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 NLRX1Q86UT6 975 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 SLFN12Q8IYM2 578 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 SYTL4Q96C24 671 aaPredicted RBP7□□□□□ -1.29
PRPF39-210ENST00000556718 REV1Q9UBZ9 1251 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 KLHL3Q9UH77 587 aa7□□□□□ -1.29
PRPF39-210ENST00000556718 USP2O75604 605 aaPredicted RBP6.99□□□□□ -1.29
PRPF39-210ENST00000556718 F13A1P00488 732 aa6.99□□□□□ -1.29
PRPF39-210ENST00000556718 ADGRF1Q5T601 910 aa6.99□□□□□ -1.29
PRPF39-210ENST00000556718 ASPNQ9BXN1 380 aa6.99□□□□□ -1.29
PRPF39-210ENST00000556718 MBD1Q9UIS9 605 aaPredicted RBP6.99□□□□□ -1.29
PRPF39-210ENST00000556718 POLR3KQ9Y2Y1 108 aaPredicted RBP6.99□□□□□ -1.29
PRPF39-210ENST00000556718 OR14I1A6ND48 311 aa6.98□□□□□ -1.29
PRPF39-210ENST00000556718 GRIN3BO60391 1043 aa6.98□□□□□ -1.29
PRPF39-210ENST00000556718 EPHB3P54753 998 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms