RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CWC27Q6UX04 472 aaKnown RBP12.36□□□□□ -0.43
SNX6-208ENST00000556712 TANGO6Q9C0B7 1094 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 VCPKMTQ9H867 229 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 INCENPQ9NQS7 918 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 DIAPH3Q9NSV4 1193 aa12.36□□□□□ -0.43
SNX6-208ENST00000556712 PLIN4Q96Q06 1357 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 CENPFP49454 3210 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 SPDYE16A6NNV3 312 aaPredicted RBP12.35□□□□□ -0.43
SNX6-208ENST00000556712 RAD21O60216 631 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 CNMDO75829 334 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 GNRH1P01148 92 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 FAM47AQ5JRC9 791 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
SNX6-208ENST00000556712 CATSPERGQ6ZRH7 1159 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 RAET1EQ8TD07 263 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 ARMC5Q96C12 935 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 IL25Q9H293 177 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 RBPJLQ9UBG7 517 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 MORF4L1Q9UBU8 362 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 TMX2Q9Y320 296 aa12.35□□□□□ -0.43
SNX6-208ENST00000556712 IGKV6D-41A0A0C4DH26 115 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 FGAP02671 866 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 HAND2P61296 217 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 ERVK-9P63128 1117 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 ERVK-24P63145 666 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 PDE4BQ07343 736 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 Q3C1V9 767 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 ZNF333Q96JL9 665 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 PORCNQ9H237 461 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 SH2D4AQ9H788 454 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 KANSL2Q9H9L4 492 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 BTBD7Q9P203 1132 aa12.34□□□□□ -0.43
SNX6-208ENST00000556712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNX6-208ENST00000556712 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
SNX6-208ENST00000556712 TSPY3P0CV98 308 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 TSPY8P0CW00 308 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 ELNP15502 786 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 FLT3LGP49771 235 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 PRMT2P55345 433 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 ALX1Q15699 326 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 TICAM2Q86XR7 235 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
SNX6-208ENST00000556712 LRRC47Q8N1G4 583 aaKnown RBP12.33□□□□□ -0.44
SNX6-208ENST00000556712 GPRC5AQ8NFJ5 357 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 GTF3C2Q8WUA4 911 aaPredicted RBP12.33□□□□□ -0.44
SNX6-208ENST00000556712 LPAR1Q92633 364 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 NUP88Q99567 741 aaPredicted RBP12.33□□□□□ -0.44
SNX6-208ENST00000556712 NBPF3Q9H094 633 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 ZNF287Q9HBT7 754 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 FBXO28Q9NVF7 368 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 ZMYM6O95789 1325 aa12.33□□□□□ -0.44
SNX6-208ENST00000556712 HIP1O00291 1037 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 WDR46O15213 610 aaKnown RBP12.32□□□□□ -0.44
SNX6-208ENST00000556712 NMT2O60551 498 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 FLOT1O75955 427 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 HOXD10P28358 340 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 GRK4P32298 578 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 TFAP4Q01664 338 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 FAM83BQ5T0W9 1011 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 TBC1D10CQ8IV04 446 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 NEDD1Q8NHV4 660 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 COA7Q96BR5 231 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 CHMP4CQ96CF2 233 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 ANAPC4Q9UJX5 808 aa12.32□□□□□ -0.44
SNX6-208ENST00000556712 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 ADCY3O60266 1144 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 NDUFB10O96000 172 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
SNX6-208ENST00000556712 COG2Q14746 738 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 MTFR1Q15390 333 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 RRP12Q5JTH9 1297 aaKnown RBP12.31□□□□□ -0.44
SNX6-208ENST00000556712 WDR78Q5VTH9 848 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 LBX2Q6XYB7 198 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 RASGRP2Q7LDG7 609 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 MTMR4Q9NYA4 1195 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 NYAP2Q9P242 653 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 RABGAP1Q9Y3P9 1069 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 NEDD4P46934 1319 aa12.31□□□□□ -0.44
SNX6-208ENST00000556712 BRCA2P51587 3418 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 ZNF236Q9UL36 1845 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 F5H6K3 240 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 RANBP6O60518 1105 aaKnown RBP12.3□□□□□ -0.44
SNX6-208ENST00000556712 TTLL1O95922 423 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 DSG3P32926 999 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 KLRC3Q07444 240 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 CENPQQ7L2Z9 268 aaPredicted RBP12.3□□□□□ -0.44
SNX6-208ENST00000556712 GPR142Q7Z601 462 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 NBPF11Q86T75 865 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 SLAIN1Q8ND83 568 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 IL17RBQ9NRM6 502 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 BIN2Q9UBW5 565 aaPredicted RBP12.3□□□□□ -0.44
SNX6-208ENST00000556712 GJD2Q9UKL4 321 aa12.3□□□□□ -0.44
SNX6-208ENST00000556712 ORC4O43929 436 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms