RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 CETN2P41208 172 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 DNM2P50570 870 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 STOX1Q6ZVD7 989 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 TBC1D5Q92609 795 aa16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 RPGRQ92834 1020 aaKnown RBP16.78■□□□□ 0.28
ARHGEF40-207ENST00000556399 ANKRD62A6NC57 917 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 KRT13P13646 458 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 CC2D1AQ6P1N0 951 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 TRIM58Q8NG06 486 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 SDR42E1Q8WUS8 393 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 GREM2Q9H772 168 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 MYO1AQ9UBC5 1043 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 TAF6LQ9Y6J9 622 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 SALL3Q9BXA9 1300 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 AP5Z1O43299 807 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 RPN1P04843 607 aaKnown RBP16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 TXKP42681 527 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 GYS2P54840 703 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 E4F1Q66K89 784 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 CCDC91Q7Z6B0 441 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 ANKS4BQ8N8V4 417 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 PANX2Q96RD6 677 aa16.77■□□□□ 0.28
ARHGEF40-207ENST00000556399 SF3B2Q13435 895 aaKnown RBP16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 RFX7Q2KHR2 1363 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 CABP7Q86V35 215 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 RASAL2Q9UJF2 1139 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 TLDC2A0PJX2 215 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 ADAMTS2O95450 1211 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 SLC9C1Q4G0N8 1177 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 CFAP221Q4G0U5 840 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 STXBP4Q6ZWJ1 553 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 SYCP3Q8IZU3 236 aa16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 NSRP1Q9H0G5 558 aaKnown RBP16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.27
ARHGEF40-207ENST00000556399 DLC1Q96QB1 1528 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 SLFN14P0C7P3 912 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 GNGT1P63211 74 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 PAK2Q13177 524 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 GBP6Q6ZN66 633 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 HINFPQ9BQA5 517 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 ATG3Q9NT62 314 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.278e-7■■□□□ 14.5
ARHGEF40-207ENST00000556399 PCDHB6Q9Y5E3 794 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 C6orf229H3BNL8 230 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 IFNAR1P17181 557 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 RRAGAQ7L523 313 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 SCLT1Q96NL6 688 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 EPC1Q9H2F5 836 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 SMIM23A6NLE4 172 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 PDE8BO95263 885 aa16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 EZRP15311 586 aaKnown RBP16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 CCDC84Q86UT8 332 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF40-207ENST00000556399 ST7Q9NRC1 585 aa16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 DYMQ7RTS9 669 aa16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 PLEKHA4Q9H4M7 779 aa16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 PRM3Q9NNZ6 103 aa16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 USP32Q8NFA0 1604 aa16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 ABCB6Q9NP58 842 aa16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 ARID4AP29374 1257 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 KLHL7Q8IXQ5 586 aa16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 ZSWIM5Q9P217 1185 aa16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 SRPRBQ9Y5M8 271 aaKnown RBP16.75■□□□□ 0.27
ARHGEF40-207ENST00000556399 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 RNF40O75150 1001 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 LDHBP07195 334 aaKnown RBP16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 PPARDQ03181 441 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 NONOQ15233 471 aaKnown RBP eCLIP16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 BCAS4Q8TDM0 211 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 EEF2KMTQ96G04 330 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 ZCCHC17Q9NP64 241 aaKnown RBP16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 INCENPQ9NQS7 918 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 H7C1W4 665 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 BCAMP50895 628 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 PARP10Q53GL7 1025 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 CCDC65Q8IXS2 484 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 SETDB2Q96T68 719 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 CAPS2Q9BXY5 557 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 RNF26Q9BY78 433 aaPredicted RBP16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 LRWD1Q9UFC0 647 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 TSKSQ9UJT2 592 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 ADAM21Q9UKJ8 722 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 USP17L12C9JPN9 530 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 USP17L21D6R901 530 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 PRPHP41219 470 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 BLIDQ8IZY5 108 aa16.74■□□□□ 0.27
ARHGEF40-207ENST00000556399 ZMYND10O75800 440 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 CHGBP05060 677 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 CASP8Q14790 479 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 TNIP1Q15025 636 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 DCAF17Q5H9S7 520 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 HYOU1Q9Y4L1 999 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 NCAPD2Q15021 1401 aa16.73■□□□□ 0.27
ARHGEF40-207ENST00000556399 KIF4AO95239 1232 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms