RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 GUCY1A2P33402 732 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 SSRP1Q08945 709 aaKnown RBP10.72□□□□□ -0.69
ACTN1-218ENST00000556343 TROAPQ12815 778 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 PRKG1Q13976 671 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 COL9A3Q14050 684 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-218ENST00000556343 GRM4Q14833 912 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 SLFN13Q68D06 897 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 GMCL1P1Q8NEA9 526 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.72□□□□□ -0.69
ACTN1-218ENST00000556343 NKX2-3Q8TAU0 364 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 SENP2Q9HC62 589 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 ISY1Q9ULR0 285 aaKnown RBP10.72□□□□□ -0.69
ACTN1-218ENST00000556343 DDX60LQ5H9U9 1706 aaKnown RBP10.72□□□□□ -0.69
ACTN1-218ENST00000556343 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
ACTN1-218ENST00000556343 C19orf81C9J6K1 198 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 USP17L10C9JJH3 530 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 F5H6K3 240 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 LARGE1O95461 756 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 SLURP2P0DP57 97 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 XBP1P17861 261 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 INPP5BP32019 993 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 SLC1A4P43007 532 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 KLRC3Q07444 240 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 NID2Q14112 1375 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 RRP1BQ14684 758 aaKnown RBP10.71□□□□□ -0.69
ACTN1-218ENST00000556343 USP17L2Q6R6M4 530 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 CCDC144CPQ8IYA2 1237 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 LRRC47Q8N1G4 583 aaKnown RBP10.71□□□□□ -0.69
ACTN1-218ENST00000556343 ZNF280CQ8ND82 737 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 RBM46Q8TBY0 533 aaKnown RBP10.71□□□□□ -0.69
ACTN1-218ENST00000556343 MYL10Q9BUA6 226 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 WDR18Q9BV38 432 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 ZNF408Q9H9D4 720 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-218ENST00000556343 HPS5Q9UPZ3 1129 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 MTMR7Q9Y216 660 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 TMX2Q9Y320 296 aa10.71□□□□□ -0.69
ACTN1-218ENST00000556343 IFNAR1P17181 557 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 PTPRAP18433 802 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 RXRAP19793 462 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 ADD1P35611 737 aaKnown RBP10.7□□□□□ -0.7
ACTN1-218ENST00000556343 NUCB2P80303 420 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 PPATQ06203 517 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 TRAF1Q13077 416 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 CCDC96Q2M329 555 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 RAB11FIP4Q86YS3 637 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 SMC1BQ8NDV3 1235 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 CHURC1Q8WUH1 139 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 LPAR1Q92633 364 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 ZKSCAN4Q969J2 545 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-218ENST00000556343 SLC10A4Q96EP9 437 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 VCPKMTQ9H867 229 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 NCOA5Q9HCD5 579 aaKnown RBP10.7□□□□□ -0.7
ACTN1-218ENST00000556343 GBA2Q9HCG7 927 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-218ENST00000556343 TMOD4Q9NZQ9 345 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 ZHX2Q9Y6X8 837 aa10.7□□□□□ -0.7
ACTN1-218ENST00000556343 PTPDC1A2A3K4 754 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 KLRF2D3W0D1 207 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 CELF2O95319 508 aaKnown RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 DEXIO95424 95 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 POTEIP0CG38 1075 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 POTEJP0CG39 1038 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 PDHBP11177 359 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 BMP3P12645 472 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 GJB2P29033 226 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 SPP2Q13103 211 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 IKQ13123 557 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 TRIM29Q14134 588 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 LARP1BQ659C4 914 aaKnown RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 TMTC3Q6ZXV5 915 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 FAM160B2Q86V87 743 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 ERO1BQ86YB8 467 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 SMARCC2Q8TAQ2 1214 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 RRP36Q96EU6 259 aaKnown RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 GMCL1Q96IK5 515 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 SLC26A6Q9BXS9 759 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 RNF26Q9BY78 433 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 KIAA1683Q9H0B3 1180 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 CHMP5Q9NZZ3 219 aa10.69□□□□□ -0.7
ACTN1-218ENST00000556343 ORC3Q9UBD5 711 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 SEC63Q9UGP8 760 aaKnown RBP10.69□□□□□ -0.7
ACTN1-218ENST00000556343 STK36Q9NRP7 1315 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 H3BQV1 296 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 CXCL11O14625 94 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 PRPF3O43395 683 aaKnown RBP10.68□□□□□ -0.7
ACTN1-218ENST00000556343 SNHG28P0DPA3 235 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 YY1P25490 414 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 CDC27P30260 824 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 BACE1P56817 501 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 JAG1P78504 1218 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 ZNF543Q08ER8 600 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 VGLL4Q14135 290 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 IFFO2Q5TF58 517 aa10.68□□□□□ -0.7
ACTN1-218ENST00000556343 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms