RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 ROBO3Q96MS0 1386 aa8.93□□□□□ -0.98
PCNX4-211ENST00000555929 TRIM75PA6NK02 468 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 HMGB1P09429 215 aaKnown RBP8.92□□□□□ -0.98
PCNX4-211ENST00000555929 FGRP09769 529 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 MCM5P33992 734 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 HTRA3P83110 453 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 SART3Q15020 963 aaKnown RBP8.92□□□□□ -0.98
PCNX4-211ENST00000555929 MAP3K11Q16584 847 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 LDLRAD1Q5T700 205 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 NFXL1Q6ZNB6 911 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 SAPCD2Q86UD0 394 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 MB21D2Q8IYB1 491 aaPredicted RBP8.92□□□□□ -0.98
PCNX4-211ENST00000555929 NEDD1Q8NHV4 660 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 KCNB2Q92953 911 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 ZSCAN10Q96SZ4 725 aaPredicted RBP8.92□□□□□ -0.98
PCNX4-211ENST00000555929 FEZ1Q99689 392 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 KANSL2Q9H9L4 492 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 AS3MTQ9HBK9 375 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 NAP1L2Q9ULW6 460 aaPredicted RBP8.92□□□□□ -0.98
PCNX4-211ENST00000555929 CYP46A1Q9Y6A2 500 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 TLL2Q9Y6L7 1015 aa8.92□□□□□ -0.98
PCNX4-211ENST00000555929 NAV1Q8NEY1 1877 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 TNKSO95271 1327 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 EEF2P13639 858 aaKnown RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 GUCY1A2P33402 732 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 NEK4P51957 841 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 ANAPC15P60006 121 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 SPP2Q13103 211 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 COL9A3Q14050 684 aaPredicted RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 WTAPQ15007 396 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 DEFB115Q30KQ5 88 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 CCDC178Q5BJE1 867 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 TMEM67Q5HYA8 995 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 NOL9Q5SY16 702 aaKnown RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 RGMBQ6NW40 437 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 Q6ZUG5 572 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 NOL8Q76FK4 1167 aaKnown RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 DHX32Q7L7V1 743 aaKnown RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 ERO1BQ86YB8 467 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 ACER1Q8TDN7 264 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 RNF166Q96A37 237 aaPredicted RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 OPTNQ96CV9 577 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 CEP95Q96GE4 821 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 TBC1D32Q96NH3 1257 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 KAT14Q9H8E8 782 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 ARHGEF10LQ9HCE6 1279 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 GPHNQ9NQX3 736 aaPredicted RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 IL17RBQ9NRM6 502 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 PDRG1Q9NUG6 133 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 MTMR4Q9NYA4 1195 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 POLR2AP24928 1970 aaKnown RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 BAZ2AQ9UIF9 1905 aaKnown RBP8.91□□□□□ -0.98
PCNX4-211ENST00000555929 ECM29Q5VYK3 1845 aa8.91□□□□□ -0.98
PCNX4-211ENST00000555929 MYH1P12882 1939 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 CCDC69A6NI79 296 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 TTLL1O95922 423 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 RPS6KB1P23443 525 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 ECE1P42892 770 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 RBM25P49756 843 aaKnown RBP8.9□□□□□ -0.98
PCNX4-211ENST00000555929 ANTXR2P58335 489 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 C1QTNF8P60827 252 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 EXOSC10Q01780 885 aaKnown RBP8.9□□□□□ -0.98
PCNX4-211ENST00000555929 PPATQ06203 517 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 PPP4R3BQ5MIZ7 849 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 IFIT1BQ5T764 474 aaKnown RBP8.9□□□□□ -0.98
PCNX4-211ENST00000555929 CYP4F22Q6NT55 531 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 RUFY3Q7L099 469 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 LRRC47Q8N1G4 583 aaKnown RBP8.9□□□□□ -0.98
PCNX4-211ENST00000555929 ZNF280CQ8ND82 737 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
PCNX4-211ENST00000555929 GINM1Q9NU53 330 aa8.9□□□□□ -0.98
PCNX4-211ENST00000555929 IGKV6D-41A0A0C4DH26 115 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 SPDYE5A6NIY4 337 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 UNCXA6NJT0 531 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 USP17L10C9JJH3 530 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 IRF6O14896 467 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 GJA5P36382 358 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 HMGCS2P54868 508 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 DGKZQ13574 1117 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 MTMR2Q13614 643 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 SYNE3Q6ZMZ3 975 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 GADL1Q6ZQY3 521 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 DGKHQ86XP1 1220 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 RAB11FIP4Q86YS3 637 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 SPICE1Q8N0Z3 855 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 ENAHQ8N8S7 591 aaPredicted RBP8.89□□□□□ -0.99
PCNX4-211ENST00000555929 KHSRPQ92945 711 aaKnown RBP eCLIP8.89□□□□□ -0.994e-6■■■■□ 21.9
PCNX4-211ENST00000555929 BRF1Q92994 677 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 WNK4Q96J92 1243 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 TMEM47Q9BQJ4 181 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 TM6SF1Q9BZW5 370 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 SH2D4AQ9H788 454 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 SENP2Q9HC62 589 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 TCP11L1Q9NUJ3 509 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 TMOD4Q9NZQ9 345 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 NYAP2Q9P242 653 aa8.89□□□□□ -0.99
PCNX4-211ENST00000555929 CDK5RAP2Q96SN8 1893 aa8.88□□□□□ -0.99
PCNX4-211ENST00000555929 A0A1W2PRG0 241 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms