RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 FAM177BA6PVY3 158 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 ZBBXA8MT70 800 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 ADM5C9JUS6 153 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 IGSF3O75054 1194 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 IFIT1P09914 478 aaKnown RBP8.13□□□□□ -1.11
SLIRP-204ENST00000555890 GTF2E1P29083 439 aaPredicted RBP8.13□□□□□ -1.11
SLIRP-204ENST00000555890 HSPA4P34932 840 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 INHBEP58166 350 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 TIMM10P62072 90 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 CAP1Q01518 475 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 AOC3Q16853 763 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 TTC39AQ5SRH9 613 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 TMEM164Q5U3C3 297 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 DGLUCYQ7Z3D6 616 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 NIM1KQ8IY84 436 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 DNAJC2Q99543 621 aaKnown RBP8.13□□□□□ -1.11
SLIRP-204ENST00000555890 NYXQ9GZU5 481 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 RNF208Q9H0X6 261 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 SLKQ9H2G2 1235 aaPredicted RBP8.13□□□□□ -1.11
SLIRP-204ENST00000555890 GREM2Q9H772 168 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 CHMP5Q9NZZ3 219 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 CNOT7Q9UIV1 285 aaKnown RBP8.13□□□□□ -1.11
SLIRP-204ENST00000555890 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 NOVA2Q9UNW9 492 aaKnown RBP8.13□□□□□ -1.11
SLIRP-204ENST00000555890 RIPOR2Q9Y4F9 1068 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 REV3LO60673 3130 aa8.13□□□□□ -1.11
SLIRP-204ENST00000555890 RTL9Q8NET4 1388 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 MROH5Q6ZUA9 1318 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 YDJCA8MPS7 323 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 NPHP1O15259 732 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 HRO43593 1189 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 NTSR2O95665 410 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 FBXO45P0C2W1 286 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 CCL5P13501 91 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 HCLS1P14317 486 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-204ENST00000555890 IGHMBP2P38935 993 aaKnown RBP8.12□□□□□ -1.11
SLIRP-204ENST00000555890 KCNJ4P48050 445 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 SMAD3P84022 425 aaKnown RBP8.12□□□□□ -1.11
SLIRP-204ENST00000555890 NMIQ13287 307 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-204ENST00000555890 GRIN2CQ14957 1233 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 ATP2B3Q16720 1220 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 DCPSQ96C86 337 aaKnown RBP8.12□□□□□ -1.11
SLIRP-204ENST00000555890 IL17RAQ96F46 866 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 XAGE2Q96GT9 111 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 MPHOSPH8Q99549 860 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 SLC4A5Q9BY07 1137 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 RTFDC1Q9BY42 306 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-204ENST00000555890 LSG1Q9H089 658 aaKnown RBP8.12□□□□□ -1.11
SLIRP-204ENST00000555890 VPS33BQ9H267 617 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 PAG1Q9NWQ8 432 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-204ENST00000555890 BPTFQ12830 3046 aa8.12□□□□□ -1.11
SLIRP-204ENST00000555890 USP17L3A6NCW0 530 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 USP17L4A6NCW7 530 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 PPIP5K2O43314 1243 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 RAD17O75943 681 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 PDE8BO95263 885 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 SGPL1O95470 568 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 ZKSCAN1P17029 563 aaPredicted RBP8.11□□□□□ -1.11
SLIRP-204ENST00000555890 ERCC3P19447 782 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 NEK4P51957 841 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 KMT5BQ4FZB7 885 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 SLC10A5Q5PT55 438 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 RNF20Q5VTR2 975 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 USP17L2Q6R6M4 530 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 Q6ZNB5 142 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 USP17L1Q7RTZ2 530 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 NECAB2Q7Z6G3 386 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 KBTBD3Q8NAB2 608 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 STK32AQ8WU08 396 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 CRAMP1Q96RY5 1269 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 CDC5LQ99459 802 aaKnown RBP8.11□□□□□ -1.11
SLIRP-204ENST00000555890 MYH7P12883 1935 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 RIC1Q4ADV7 1423 aa8.11□□□□□ -1.11
SLIRP-204ENST00000555890 ASTN2O75129 1339 aaPredicted RBP8.1□□□□□ -1.11
SLIRP-204ENST00000555890 CCDC171Q6TFL3 1326 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 ARAP2Q8WZ64 1704 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 RBM47A0AV96 593 aaKnown RBP8.1□□□□□ -1.11
SLIRP-204ENST00000555890 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 CYSRT1A8MQ03 144 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 PIK3CDO00329 1044 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 GOLIM4O00461 696 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 KRT38O76015 456 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 UQCRFS1P1P0C7P4 283 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 SLC5A1P13866 664 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 SF3B3Q15393 1217 aaKnown RBP8.1□□□□□ -1.11
SLIRP-204ENST00000555890 PUM3Q15397 648 aaKnown RBP8.1□□□□□ -1.11
SLIRP-204ENST00000555890 MCMDC2Q4G0Z9 681 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
SLIRP-204ENST00000555890 LPIN2Q92539 896 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 PAWRQ96IZ0 340 aaKnown RBP8.1□□□□□ -1.11
SLIRP-204ENST00000555890 ZNF512BQ96KM6 892 aaPredicted RBP8.1□□□□□ -1.11
SLIRP-204ENST00000555890 FAM227BQ96M60 508 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 GAS2L1Q99501 681 aaPredicted RBP8.1□□□□□ -1.11
SLIRP-204ENST00000555890 ANTXR1Q9H6X2 564 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 HELLSQ9NRZ9 838 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 FKBPLQ9UIM3 349 aa8.1□□□□□ -1.11
SLIRP-204ENST00000555890 MAP1BP46821 2468 aaKnown RBP8.09□□□□□ -1.11
SLIRP-204ENST00000555890 USP17L5A8MUK1 530 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms