RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CNMDO75829 334 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 FLOT1O75955 427 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 GNAT2P19087 354 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 TDO2P48775 406 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 TRIM32Q13049 653 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 MAP2K5Q13163 448 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 MORN1Q5T089 497 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 MFSD14CQ5VZR4 134 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 UBE2Q1Q7Z7E8 422 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 YTHDC1Q96MU7 727 aaKnown RBP18.48■□□□□ 0.55
SNX6-205ENST00000555648 CRISPLD2Q9H0B8 497 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 KANSL2Q9H9L4 492 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 TMX2Q9Y320 296 aa18.48■□□□□ 0.55
SNX6-205ENST00000555648 EVI5O60447 810 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 PLS1Q14651 629 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 GIMAP6Q6P9H5 292 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 SPICE1Q8N0Z3 855 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 MB21D1Q8N884 522 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 ANKLE1Q8NAG6 615 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 PAWRQ96IZ0 340 aaKnown RBP18.47■□□□□ 0.55
SNX6-205ENST00000555648 FSD1Q9BTV5 496 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 VCPKMTQ9H867 229 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 ZNF287Q9HBT7 754 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 GOPCQ9HD26 462 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 BTBD7Q9P203 1132 aa18.47■□□□□ 0.55
SNX6-205ENST00000555648 NAV1Q8NEY1 1877 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 GPAA1O43292 621 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 PTPREP23469 700 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 POTEEQ6S8J3 1075 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 CLEC10AQ8IUN9 316 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 STK11IPQ8N1F8 1099 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 USP6NLQ92738 828 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 NACAP1Q9BZK3 213 aa18.46■□□□□ 0.55
SNX6-205ENST00000555648 TNRC18O15417 2968 aaPredicted RBP18.46■□□□□ 0.55
SNX6-205ENST00000555648 WDR46O15213 610 aaKnown RBP18.45■□□□□ 0.54
SNX6-205ENST00000555648 EEF2P13639 858 aaKnown RBP18.45■□□□□ 0.54
SNX6-205ENST00000555648 CCL14Q16627 93 aa18.45■□□□□ 0.54
SNX6-205ENST00000555648 SBK1Q52WX2 424 aa18.45■□□□□ 0.54
SNX6-205ENST00000555648 DPP9Q86TI2 863 aa18.45■□□□□ 0.54
SNX6-205ENST00000555648 CRBNQ96SW2 442 aa18.45■□□□□ 0.54
SNX6-205ENST00000555648 NBPF3Q9H094 633 aa18.45■□□□□ 0.54
SNX6-205ENST00000555648 SPATC1LQ9H0A9 340 aa18.45■□□□□ 0.54
SNX6-205ENST00000555648 SLC5A4Q9NY91 659 aa18.45■□□□□ 0.54
SNX6-205ENST00000555648 COLQQ9Y215 455 aaPredicted RBP18.45■□□□□ 0.54
SNX6-205ENST00000555648 GSG1L2A8MUP6 293 aa18.44■□□□□ 0.54
SNX6-205ENST00000555648 SMIM22K7EJ46 135 aa18.44■□□□□ 0.54
SNX6-205ENST00000555648 MX1P20591 662 aa18.44■□□□□ 0.54
SNX6-205ENST00000555648 DSG3P32926 999 aa18.44■□□□□ 0.54
SNX6-205ENST00000555648 CACNB2Q08289 660 aaPredicted RBP18.44■□□□□ 0.54
SNX6-205ENST00000555648 MAP3K21Q5TCX8 1036 aa18.44■□□□□ 0.54
SNX6-205ENST00000555648 ANKRD45Q5TZF3 282 aa18.44■□□□□ 0.54
SNX6-205ENST00000555648 CHRDL2Q6WN34 429 aa18.44■□□□□ 0.54
SNX6-205ENST00000555648 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
SNX6-205ENST00000555648 MOV10L1Q9BXT6 1211 aaKnown RBP18.44■□□□□ 0.54
SNX6-205ENST00000555648 DDX60LQ5H9U9 1706 aaKnown RBP18.43■□□□□ 0.54
SNX6-205ENST00000555648 STRNO43815 780 aa18.43■□□□□ 0.54
SNX6-205ENST00000555648 SLC3A2P08195 630 aaKnown RBP18.43■□□□□ 0.54
SNX6-205ENST00000555648 GRB14Q14449 540 aa18.43■□□□□ 0.54
SNX6-205ENST00000555648 NCAPG2Q86XI2 1143 aa18.43■□□□□ 0.54
SNX6-205ENST00000555648 SIAH1Q8IUQ4 282 aa18.43■□□□□ 0.54
SNX6-205ENST00000555648 C11orf49Q9H6J7 331 aa18.43■□□□□ 0.54
SNX6-205ENST00000555648 PATL2C9JE40 543 aaKnown RBP18.42■□□□□ 0.54
SNX6-205ENST00000555648 M0R2C6 588 aa18.42■□□□□ 0.54
SNX6-205ENST00000555648 ERCC3P19447 782 aa18.42■□□□□ 0.54
SNX6-205ENST00000555648 CNGA1P29973 690 aa18.42■□□□□ 0.54
SNX6-205ENST00000555648 KIAA1755Q5JYT7 1200 aa18.42■□□□□ 0.54
SNX6-205ENST00000555648 SHCBP1Q8NEM2 672 aa18.42■□□□□ 0.54
SNX6-205ENST00000555648 DIS3LQ8TF46 1054 aaKnown RBP18.42■□□□□ 0.54
SNX6-205ENST00000555648 ATG4CQ96DT6 458 aa18.42■□□□□ 0.54
SNX6-205ENST00000555648 MROH8Q9H579 483 aa18.42■□□□□ 0.54
SNX6-205ENST00000555648 OGDHLQ9ULD0 1010 aa18.42■□□□□ 0.54
SNX6-205ENST00000555648 CCND3P30281 292 aaPredicted RBP18.41■□□□□ 0.54
SNX6-205ENST00000555648 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
SNX6-205ENST00000555648 OTUD7AQ8TE49 926 aaPredicted RBP18.41■□□□□ 0.54
SNX6-205ENST00000555648 NAPBQ9H115 298 aa18.41■□□□□ 0.54
SNX6-205ENST00000555648 SLC25A27O95847 323 aa18.4■□□□□ 0.54
SNX6-205ENST00000555648 HOXC6P09630 235 aa18.4■□□□□ 0.54
SNX6-205ENST00000555648 RASA1P20936 1047 aa18.4■□□□□ 0.54
SNX6-205ENST00000555648 ADORA2AP29274 412 aa18.4■□□□□ 0.54
SNX6-205ENST00000555648 PDE4BQ07343 736 aa18.4■□□□□ 0.54
SNX6-205ENST00000555648 IFNL3Q8IZI9 196 aa18.4■□□□□ 0.54
SNX6-205ENST00000555648 CTDP1Q9Y5B0 961 aaPredicted RBP18.4■□□□□ 0.54
SNX6-205ENST00000555648 MSCO60682 206 aa18.39■□□□□ 0.53
SNX6-205ENST00000555648 FCER1AP12319 257 aa18.39■□□□□ 0.53
SNX6-205ENST00000555648 FAM83BQ5T0W9 1011 aa18.39■□□□□ 0.53
SNX6-205ENST00000555648 NPLOC4Q8TAT6 608 aa18.39■□□□□ 0.53
SNX6-205ENST00000555648 NYAP2Q9P242 653 aa18.39■□□□□ 0.53
SNX6-205ENST00000555648 PCDH10Q9P2E7 1040 aa18.39■□□□□ 0.53
SNX6-205ENST00000555648 DOCK3Q8IZD9 2030 aa18.39■□□□□ 0.53
SNX6-205ENST00000555648 PRDM1O75626 825 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 CYP2C19P33261 490 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 COPB2P35606 906 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
SNX6-205ENST00000555648 AAMPQ13685 434 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 C7orf61Q8IZ16 206 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 ABRAQ8N0Z2 381 aa18.38■□□□□ 0.53
SNX6-205ENST00000555648 SEC62Q99442 399 aaKnown RBP18.38■□□□□ 0.53
SNX6-205ENST00000555648 EPB41L4AQ9HCS5 686 aaPredicted RBP18.38■□□□□ 0.53
SNX6-205ENST00000555648 FLRT1Q9NZU1 646 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms