RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 RAB3GAP1Q15042 981 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 TMEM179Q6ZVK1 233 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 CLEC10AQ8IUN9 316 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 DCPSQ96C86 337 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 SLC26A6Q9BXS9 759 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 WDR33Q9C0J8 1336 aaKnown RBP11.24□□□□□ -0.61
HNRNPC-220ENST00000555585 H3BQV1 296 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 GH2P01242 217 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 IFNAR1P17181 557 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 EPHX2P34913 555 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 AKAP17AQ02040 695 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 RRP1BQ14684 758 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 GRM4Q14833 912 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 NTRK3Q16288 839 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 SHROOM1Q2M3G4 852 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 NBPF12Q5TAG4 269 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 USP50Q70EL3 339 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 CMTR1Q8N1G2 835 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 TNPO1Q92973 898 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 PHKBQ93100 1093 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 HOOK2Q96ED9 719 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 KANSL2Q9H9L4 492 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 PPP2R3BQ9Y5P8 575 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 PITPNM2Q9BZ72 1349 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 MYH6P13533 1939 aa11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 POLR2AP24928 1970 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-220ENST00000555585 IQCA1LA6NCM1 817 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 PLEKHA8P1O95397 391 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 BRD1O95696 1058 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 EEF2P13639 858 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 PDIA4P13667 645 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 FDPSP14324 419 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 SCN4AP35499 1836 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 NOVP48745 357 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 GNAQP50148 359 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 ICA1Q05084 483 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 PRAMEF18Q5VWM3 479 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 DCAF15Q66K64 600 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 MAP3K14Q99558 947 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 NYAP2Q9P242 653 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 ZDHHC9Q9Y397 364 aa11.22□□□□□ -0.61
HNRNPC-220ENST00000555585 STK36Q9NRP7 1315 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 RAD21O60216 631 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 PARP1P09874 1014 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 GUCY1A2P33402 732 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 CAP2P40123 477 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 JAG1P78504 1218 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 MAP3K10Q02779 954 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 EAPPQ56P03 285 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 TMTC3Q6ZXV5 915 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 SULF1Q8IWU6 871 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 WASF1Q92558 559 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 C8orf76Q96K31 380 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 ALG1Q9BT22 464 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 ZNF341Q9BYN7 854 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 ZBTB21Q9ULJ3 1066 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 ISY1Q9ULR0 285 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 MTMR6Q9Y217 621 aa11.21□□□□□ -0.61
HNRNPC-220ENST00000555585 WDR90Q96KV7 1748 aa11.21□□□□□ -0.62
HNRNPC-220ENST00000555585 USP17L5A8MUK1 530 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 DEXIO95424 95 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 F13A1P00488 732 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 GOLGA8HP0CJ92 632 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 GUCY1B3Q02153 619 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 TRIM29Q14134 588 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 CCDC96Q2M329 555 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 SUPT20HL1Q3ZLR7 823 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 CDC37L1Q7L3B6 337 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 STAG2Q8N3U4 1231 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 SRBD1Q8N5C6 995 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 MKL1Q969V6 931 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 MS4A3Q96HJ5 214 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 GBP4Q96PP9 640 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 RNF26Q9BY78 433 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 TAF1DQ9H5J8 278 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
HNRNPC-220ENST00000555585 FRMPD2Q68DX3 1309 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 PALM3A6NDB9 673 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 PHF20L1A8MW92 1017 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 ADM5C9JUS6 153 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 PRPF3O43395 683 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 ASNSP08243 561 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 PDHBP11177 359 aa11.19□□□□□ -0.62
HNRNPC-220ENST00000555585 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms