RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 KRT222Q8N1A0 295 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 CERS5Q8N5B7 392 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 CNKSR1Q969H4 720 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 MCM9Q9NXL9 1143 aa27.1■■□□□ 1.93
STRN3-207ENST00000555358 CBFA2T2O43439 604 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 CUTAO60888 179 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 LIFRP42702 1097 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 USP5P45974 858 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 GNL2Q13823 731 aaKnown RBP27.09■■□□□ 1.93
STRN3-207ENST00000555358 LONRF3Q496Y0 759 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 FOXP4Q8IVH2 680 aaPredicted RBP27.09■■□□□ 1.93
STRN3-207ENST00000555358 ZNF446Q9NWS9 450 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 H2AFXP16104 143 aaPredicted RBP27.09■■□□□ 1.93
STRN3-207ENST00000555358 IARSP41252 1262 aaKnown RBP27.09■■□□□ 1.93
STRN3-207ENST00000555358 VSTM4Q8IW00 320 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 TGFBRAP1Q8WUH2 860 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 DBNDD1Q9H9R9 158 aa27.09■■□□□ 1.93
STRN3-207ENST00000555358 SERPINC1P01008 464 aa27.08■■□□□ 1.93
STRN3-207ENST00000555358 ETF1P62495 437 aaKnown RBP27.08■■□□□ 1.93
STRN3-207ENST00000555358 ERCC6LQ2NKX8 1250 aa27.08■■□□□ 1.93
STRN3-207ENST00000555358 KRBA2Q6ZNG9 492 aa27.08■■□□□ 1.93
STRN3-207ENST00000555358 C7orf43Q8WVR3 580 aa27.08■■□□□ 1.93
STRN3-207ENST00000555358 ESR2Q92731 530 aa27.08■■□□□ 1.93
STRN3-207ENST00000555358 NOL10Q9BSC4 688 aaKnown RBP27.08■■□□□ 1.93
STRN3-207ENST00000555358 KCNQ5Q9NR82 932 aa27.08■■□□□ 1.93
STRN3-207ENST00000555358 ARPP21Q9UBL0 812 aaPredicted RBP27.08■■□□□ 1.93
STRN3-207ENST00000555358 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.08■■□□□ 1.93
STRN3-207ENST00000555358 F8W031 263 aaPredicted RBP27.08■■□□□ 1.92
STRN3-207ENST00000555358 UBE2Q2LH0YL09 131 aa27.08■■□□□ 1.92
STRN3-207ENST00000555358 CCP110O43303 1012 aa27.08■■□□□ 1.92
STRN3-207ENST00000555358 FGRP09769 529 aa27.08■■□□□ 1.92
STRN3-207ENST00000555358 EYA3Q99504 573 aa27.08■■□□□ 1.92
STRN3-207ENST00000555358 PHLPP2Q6ZVD8 1323 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 C10orf71Q711Q0 1435 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 GPR75-ASB3A0A0A6YYF3 556 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 GOLGA8AA7E2F4 631 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 G3V3G9 751 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 MYO1BO43795 1136 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 SLFN14P0C7P3 912 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 SBK1Q52WX2 424 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 DCAF8Q5TAQ9 597 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 NAV1Q8NEY1 1877 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 STK36Q9NRP7 1315 aa27.07■■□□□ 1.92
STRN3-207ENST00000555358 BMP6P22004 513 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 WTAPQ15007 396 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 TRIM65Q6PJ69 517 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 KCNH3Q9ULD8 1083 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.06■■□□□ 1.92
STRN3-207ENST00000555358 TMEM232C9JQI7 657 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 TRIM29Q14134 588 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 CFAP100Q494V2 611 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 FANCLQ9NW38 375 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 TAOK2Q9UL54 1235 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 PCDHA5Q9Y5H7 936 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 SLC12A7Q9Y666 1083 aa27.06■■□□□ 1.92
STRN3-207ENST00000555358 SCN9AQ15858 1988 aa27.05■■□□□ 1.92
STRN3-207ENST00000555358 SART3Q15020 963 aaKnown RBP27.05■■□□□ 1.92
STRN3-207ENST00000555358 MAPKAPK5Q8IW41 473 aa27.05■■□□□ 1.92
STRN3-207ENST00000555358 INTS13Q9NVM9 706 aa27.05■■□□□ 1.92
STRN3-207ENST00000555358 MDM2Q00987 491 aaPredicted RBP27.05■■□□□ 1.92
STRN3-207ENST00000555358 PDE4BQ07343 736 aa27.05■■□□□ 1.92
STRN3-207ENST00000555358 HOMER1Q86YM7 354 aa27.05■■□□□ 1.92
STRN3-207ENST00000555358 ELOA2Q8IYF1 753 aaPredicted RBP27.05■■□□□ 1.92
STRN3-207ENST00000555358 CNNM3Q8NE01 707 aa27.05■■□□□ 1.92
STRN3-207ENST00000555358 UBAC1Q9BSL1 405 aa27.05■■□□□ 1.92
STRN3-207ENST00000555358 GAKO14976 1311 aa27.05■■□□□ 1.92
STRN3-207ENST00000555358 ERICH2A1L162 156 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 FANCGO15287 622 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 TMEM139Q8IV31 216 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 REXO1L1PQ8IX06 675 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 FAM163AQ96GL9 167 aaPredicted RBP27.04■■□□□ 1.92
STRN3-207ENST00000555358 TNKSO95271 1327 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 RHBDL3P58872 404 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 SEC23AQ15436 765 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 C12orf60Q5U649 245 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 DNAI1Q9UI46 699 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 DAGLAQ9Y4D2 1042 aa27.04■■□□□ 1.92
STRN3-207ENST00000555358 DLEC1Q9Y238 1755 aa27.03■■□□□ 1.92
STRN3-207ENST00000555358 SNED1Q8TER0 1413 aa27.03■■□□□ 1.92
STRN3-207ENST00000555358 NID2Q14112 1375 aa27.03■■□□□ 1.92
STRN3-207ENST00000555358 FOXN1O15353 648 aa27.03■■□□□ 1.92
STRN3-207ENST00000555358 FMNL1O95466 1100 aaPredicted RBP27.03■■□□□ 1.92
STRN3-207ENST00000555358 KRI1Q8N9T8 703 aaKnown RBP27.03■■□□□ 1.92
STRN3-207ENST00000555358 SLC26A6Q9BXS9 759 aa27.03■■□□□ 1.92
STRN3-207ENST00000555358 SAP30BPQ9UHR5 308 aaKnown RBP27.03■■□□□ 1.92
STRN3-207ENST00000555358 ADAMTSL1Q8N6G6 1762 aa27.03■■□□□ 1.92
STRN3-207ENST00000555358 C21orf2O43822 256 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 TOP1P11387 765 aaKnown RBP27.02■■□□□ 1.92
STRN3-207ENST00000555358 GOLGA8FQ08AF8 430 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 GOLGA8DPQ0D2H9 430 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 FCHSD1Q86WN1 690 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 NOSTRINQ8IVI9 506 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 TEX11Q8IYF3 940 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 SLC16A10Q8TF71 515 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 DYNLL2Q96FJ2 89 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 MTA3Q9BTC8 594 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 PCP11498 1178 aaKnown RBP27.02■■□□□ 1.92
STRN3-207ENST00000555358 SSRP1Q08945 709 aaKnown RBP27.02■■□□□ 1.92
STRN3-207ENST00000555358 PTPN21Q16825 1174 aa27.02■■□□□ 1.92
STRN3-207ENST00000555358 FAM47AQ5JRC9 791 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms