RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 CCDC81Q6ZN84 652 aa6.49□□□□□ -1.37
SCFD1-214ENST00000554819 VWCEQ96DN2 955 aa6.49□□□□□ -1.37
SCFD1-214ENST00000554819 Q96M66 194 aa6.49□□□□□ -1.37
SCFD1-214ENST00000554819 SLC9A7Q96T83 725 aa6.49□□□□□ -1.37
SCFD1-214ENST00000554819 ST14Q9Y5Y6 855 aa6.49□□□□□ -1.37
SCFD1-214ENST00000554819 COL17A1Q9UMD9 1497 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-214ENST00000554819 ADAMTS4O75173 837 aa6.48□□□□□ -1.37
SCFD1-214ENST00000554819 GUCY2CP25092 1073 aa6.48□□□□□ -1.37
SCFD1-214ENST00000554819 POLR2BP30876 1174 aaKnown RBP6.48□□□□□ -1.37
SCFD1-214ENST00000554819 ANGEL2Q5VTE6 544 aaKnown RBP6.48□□□□□ -1.37
SCFD1-214ENST00000554819 LSRQ86X29 649 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-214ENST00000554819 DTWD2Q8NBA8 298 aa6.48□□□□□ -1.37
SCFD1-214ENST00000554819 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
SCFD1-214ENST00000554819 SEMA3GQ9NS98 782 aa6.48□□□□□ -1.37
SCFD1-214ENST00000554819 GPATCH2Q9NW75 528 aa6.48□□□□□ -1.37
SCFD1-214ENST00000554819 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
SCFD1-214ENST00000554819 PITPNM2Q9BZ72 1349 aa6.48□□□□□ -1.37
SCFD1-214ENST00000554819 H3BS24 57 aa6.47□□□□□ -1.37
SCFD1-214ENST00000554819 CD8BP10966 210 aa6.47□□□□□ -1.37
SCFD1-214ENST00000554819 IKZF1Q13422 519 aa6.47□□□□□ -1.37
SCFD1-214ENST00000554819 NBPF12Q5TAG4 269 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-214ENST00000554819 SPRED2Q7Z698 418 aa6.47□□□□□ -1.37
SCFD1-214ENST00000554819 SLC43A3Q8NBI5 491 aa6.47□□□□□ -1.37
SCFD1-214ENST00000554819 UBE2FQ969M7 185 aa6.47□□□□□ -1.37
SCFD1-214ENST00000554819 SLC6A18Q96N87 628 aa6.47□□□□□ -1.37
SCFD1-214ENST00000554819 ASCC2Q9H1I8 757 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-214ENST00000554819 PAK6Q9NQU5 681 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-214ENST00000554819 ZSWIM5Q9P217 1185 aa6.47□□□□□ -1.37
SCFD1-214ENST00000554819 LRRN2O75325 713 aa6.46□□□□□ -1.38
SCFD1-214ENST00000554819 SSBP05455 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCFD1-214ENST00000554819 ACRP10323 421 aa6.46□□□□□ -1.38
SCFD1-214ENST00000554819 ZC3H6P61129 1189 aaKnown RBP6.46□□□□□ -1.38
SCFD1-214ENST00000554819 ARID5AQ03989 594 aa6.46□□□□□ -1.38
SCFD1-214ENST00000554819 TMPRSS7Q7RTY8 843 aa6.46□□□□□ -1.38
SCFD1-214ENST00000554819 TMEM192Q8IY95 271 aa6.46□□□□□ -1.38
SCFD1-214ENST00000554819 C19orf47Q8N9M1 422 aaKnown RBP6.46□□□□□ -1.38
SCFD1-214ENST00000554819 ENOX1Q8TC92 643 aaKnown RBP6.46□□□□□ -1.38
SCFD1-214ENST00000554819 SHDQ96IW2 340 aa6.46□□□□□ -1.38
SCFD1-214ENST00000554819 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.46□□□□□ -1.389e-10■■□□□ 11.8
SCFD1-214ENST00000554819 TINF2Q9BSI4 451 aa6.46□□□□□ -1.38
SCFD1-214ENST00000554819 LMCD1Q9NZU5 365 aa6.46□□□□□ -1.38
SCFD1-214ENST00000554819 SUCOQ9UBS9 1254 aaKnown RBP6.46□□□□□ -1.38
SCFD1-214ENST00000554819 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-214ENST00000554819 SRFP11831 508 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 FUT4P22083 530 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 PLCL1Q15111 1095 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 CLEC16AQ2KHT3 1053 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 BBS9Q3SYG4 887 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 UNC5AQ6ZN44 842 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 ZNF574Q6ZN55 896 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-214ENST00000554819 NFXL1Q6ZNB6 911 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 RUFY4Q6ZNE9 571 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 SMARCC1Q92922 1105 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-214ENST00000554819 DUSP15Q9H1R2 295 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-214ENST00000554819 ATP13A1Q9HD20 1204 aa6.45□□□□□ -1.38
SCFD1-214ENST00000554819 TPP2P29144 1249 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-214ENST00000554819 CD96P40200 585 aa6.44□□□□□ -1.38
SCFD1-214ENST00000554819 PMS1P54277 932 aaKnown RBP6.44□□□□□ -1.38
SCFD1-214ENST00000554819 ZP2Q05996 745 aa6.44□□□□□ -1.38
SCFD1-214ENST00000554819 NBPF9Q3BBW0 867 aa6.44□□□□□ -1.38
SCFD1-214ENST00000554819 WFDC3Q8IUB2 231 aa6.44□□□□□ -1.38
SCFD1-214ENST00000554819 PI4K2BQ8TCG2 481 aa6.44□□□□□ -1.38
SCFD1-214ENST00000554819 KRTAP9-2Q9BYQ4 174 aa6.44□□□□□ -1.38
SCFD1-214ENST00000554819 MKRN2Q9H000 416 aaKnown RBP6.44□□□□□ -1.38
SCFD1-214ENST00000554819 OAS3Q9Y6K5 1087 aaKnown RBP6.44□□□□□ -1.38
SCFD1-214ENST00000554819 FAM86C2PA6NEL3 165 aa6.43□□□□□ -1.38
SCFD1-214ENST00000554819 DNAJA1P31689 397 aaKnown RBP6.43□□□□□ -1.38
SCFD1-214ENST00000554819 CASP7P55210 303 aa6.43□□□□□ -1.38
SCFD1-214ENST00000554819 PPP2R5EQ16537 467 aa6.43□□□□□ -1.38
SCFD1-214ENST00000554819 SLC23A3Q6PIS1 610 aa6.43□□□□□ -1.38
SCFD1-214ENST00000554819 TTC6Q86TZ1 520 aa6.43□□□□□ -1.38
SCFD1-214ENST00000554819 TSPYL5Q86VY4 417 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-214ENST00000554819 ABI1Q8IZP0 508 aa6.43□□□□□ -1.38
SCFD1-214ENST00000554819 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
SCFD1-214ENST00000554819 ZNF512BQ96KM6 892 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-214ENST00000554819 GMLQ99445 158 aa6.43□□□□□ -1.38
SCFD1-214ENST00000554819 PHAXQ9H814 394 aaKnown RBP6.43□□□□□ -1.38
SCFD1-214ENST00000554819 A0A1W2PQH9 124 aa6.42□□□□□ -1.38
SCFD1-214ENST00000554819 NMIQ13287 307 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-214ENST00000554819 AUHQ13825 339 aaKnown RBP6.42□□□□□ -1.38
SCFD1-214ENST00000554819 ZYXQ15942 572 aaKnown RBP6.42□□□□□ -1.38
SCFD1-214ENST00000554819 ANKRD39Q53RE8 183 aa6.42□□□□□ -1.38
SCFD1-214ENST00000554819 NAALADL2Q58DX5 795 aa6.42□□□□□ -1.38
SCFD1-214ENST00000554819 NPM2Q86SE8 214 aaKnown RBP6.42□□□□□ -1.38
SCFD1-214ENST00000554819 CCDC144CPQ8IYA2 1237 aa6.42□□□□□ -1.38
SCFD1-214ENST00000554819 CCDC120Q96HB5 630 aa6.42□□□□□ -1.38
SCFD1-214ENST00000554819 DUSP13Q9UII6 198 aa6.42□□□□□ -1.38
SCFD1-214ENST00000554819 FBXL21Q9UKT6 434 aa6.42□□□□□ -1.38
SCFD1-214ENST00000554819 ZNF214Q9UL59 606 aaPredicted RBP6.42□□□□□ -1.38
SCFD1-214ENST00000554819 PCDHB12Q9Y5F1 795 aa6.42□□□□□ -1.38
SCFD1-214ENST00000554819 KRTAP9-6A0A140TA67 174 aa6.41□□□□□ -1.38
SCFD1-214ENST00000554819 IRAK1P51617 712 aa6.41□□□□□ -1.38
SCFD1-214ENST00000554819 GAB4Q2WGN9 574 aa6.41□□□□□ -1.38
SCFD1-214ENST00000554819 TNNI3KQ59H18 835 aa6.41□□□□□ -1.38
SCFD1-214ENST00000554819 CREG2Q8IUH2 290 aa6.41□□□□□ -1.38
SCFD1-214ENST00000554819 C7orf61Q8IZ16 206 aa6.41□□□□□ -1.38
SCFD1-214ENST00000554819 DAGLBQ8NCG7 672 aa6.41□□□□□ -1.38
SCFD1-214ENST00000554819 SYTL5Q8TDW5 730 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-214ENST00000554819 SYTL4Q96C24 671 aaPredicted RBP6.41□□□□□ -1.38
SCFD1-214ENST00000554819 C8orf37Q96NL8 207 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms