RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.9
LINC01397-201ENST00000554808 RUFY3Q7L099 469 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 RASEFQ8IZ41 740 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 GMCL1P1Q8NEA9 526 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 ANKS1AQ92625 1134 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 CEP95Q96GE4 821 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 JAKMIP1Q96N16 626 aaKnown RBP9.46□□□□□ -0.9
LINC01397-201ENST00000554808 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 STX8Q9UNK0 236 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 SLC45A1Q9Y2W3 748 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 CYP46A1Q9Y6A2 500 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 PDE4DIPQ5VU43 2346 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 TNKSO95271 1327 aa9.46□□□□□ -0.9
LINC01397-201ENST00000554808 DOCK3Q8IZD9 2030 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
LINC01397-201ENST00000554808 TRIM75PA6NK02 468 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 FAM155AB1AL88 458 aaPredicted RBP9.45□□□□□ -0.9
LINC01397-201ENST00000554808 IFIT3O14879 490 aaKnown RBP9.45□□□□□ -0.9
LINC01397-201ENST00000554808 WDR46O15213 610 aaKnown RBP9.45□□□□□ -0.9
LINC01397-201ENST00000554808 PRC1O43663 620 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 SEC24BO95487 1268 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 CALM1P0DP23 149 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 CALM2P0DP24 149 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 CALM3P0DP25 149 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 SLURP2P0DP57 97 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 EEF2P13639 858 aaKnown RBP9.45□□□□□ -0.9
LINC01397-201ENST00000554808 RCAN1P53805 252 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 FGD1P98174 961 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 SPP2Q13103 211 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 MTMR2Q13614 643 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 ANKRD1Q15327 319 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 RCSD1Q6JBY9 416 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 TBC1D32Q96NH3 1257 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 MAP3K14Q99558 947 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC01397-201ENST00000554808 VCPKMTQ9H867 229 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 KAT14Q9H8E8 782 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 ZSWIM6Q9HCJ5 1215 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 IL17RBQ9NRM6 502 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
LINC01397-201ENST00000554808 SMCHD1A6NHR9 2005 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 CCDC69A6NI79 296 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 RPS6KB1P23443 525 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 ATP2B2Q01814 1243 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 PPP2R5BQ15173 497 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 SEC23AQ15436 765 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 ADCK5Q3MIX3 580 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 TMEM67Q5HYA8 995 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 CYP4F22Q6NT55 531 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 SYNE3Q6ZMZ3 975 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 CYB5R4Q7L1T6 521 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 SGMS1Q86VZ5 419 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 ENAHQ8N8S7 591 aaPredicted RBP9.44□□□□□ -0.9
LINC01397-201ENST00000554808 PNMA1Q8ND90 353 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 GTF3C2Q8WUA4 911 aaPredicted RBP9.44□□□□□ -0.9
LINC01397-201ENST00000554808 DCAF4Q8WV16 495 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 AGXT2Q9BYV1 514 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 ALDH8A1Q9H2A2 487 aaPredicted RBP9.44□□□□□ -0.9
LINC01397-201ENST00000554808 INCENPQ9NQS7 918 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 CLIP2Q9UDT6 1046 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 MYPNQ86TC9 1320 aa9.44□□□□□ -0.9
LINC01397-201ENST00000554808 CCL15-CCL14A0A0B4J2E2 113 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 SH2B2O14492 632 aaPredicted RBP9.43□□□□□ -0.9
LINC01397-201ENST00000554808 PLA2G6O60733 806 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 DDAH1O94760 285 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 FDX1P10109 184 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 HOXA7P31268 230 aaPredicted RBP9.43□□□□□ -0.9
LINC01397-201ENST00000554808 GJA5P36382 358 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 TM4SF4P48230 202 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 HMGCS2P54868 508 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 ANTXR2P58335 489 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 JAG1P78504 1218 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 EXOSC10Q01780 885 aaKnown RBP9.43□□□□□ -0.9
LINC01397-201ENST00000554808 MAP2K1Q02750 393 aaPredicted RBP9.43□□□□□ -0.9
LINC01397-201ENST00000554808 RABEP1Q15276 862 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 CCL15Q16663 113 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 GPATCH4Q5T3I0 446 aaKnown RBP9.43□□□□□ -0.9
LINC01397-201ENST00000554808 CATIPQ7Z7H3 387 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 ANKRD23Q86SG2 305 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 IGDCC4Q8TDY8 1250 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 CHMP4CQ96CF2 233 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 GMCL1Q96IK5 515 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 TMEM47Q9BQJ4 181 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 AGTPBP1Q9UPW5 1226 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 TAF6LQ9Y6J9 622 aa9.43□□□□□ -0.9
LINC01397-201ENST00000554808 ZNF236Q9UL36 1845 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 F5H6K3 240 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 CA12O43570 354 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 ST18O60284 1047 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 NMT2O60551 498 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 AOC2O75106 756 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 VCAM1P19320 739 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 OSBPP22059 807 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 KIF5BP33176 963 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 KLRC3Q07444 240 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 SHROOM1Q2M3G4 852 aaPredicted RBP9.42□□□□□ -0.9
LINC01397-201ENST00000554808 ASPRV1Q53RT3 343 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms