RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PKN2Q16513 984 aaKnown RBP6.42□□□□□ -1.38
ATXN3-229ENST00000554672 AOC3Q16853 763 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 C11orf91Q3C1V1 193 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 KRT25Q7Z3Z0 450 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 CTU1Q7Z7A3 348 aaKnown RBP6.42□□□□□ -1.38
ATXN3-229ENST00000554672 Q8N3U1 123 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 PNMA5Q96PV4 448 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 RTFDC1Q9BY42 306 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-229ENST00000554672 GBA2Q9HCG7 927 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-229ENST00000554672 CNOT7Q9UIV1 285 aaKnown RBP6.42□□□□□ -1.38
ATXN3-229ENST00000554672 USP20Q9Y2K6 914 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 CDHR2Q9BYE9 1310 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 CEMIPQ8WUJ3 1361 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 SNED1Q8TER0 1413 aa6.42□□□□□ -1.38
ATXN3-229ENST00000554672 DICER1Q9UPY3 1922 aaKnown RBP6.41□□□□□ -1.38
ATXN3-229ENST00000554672 SASH3O75995 380 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
ATXN3-229ENST00000554672 ZNF157P51786 506 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-229ENST00000554672 FKBP5Q13451 457 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-229ENST00000554672 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 COX20Q5RI15 118 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 SUSD4Q5VX71 490 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 SHISA2Q6UWI4 295 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 SP8Q8IXZ3 490 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 TRPM4Q8TD43 1214 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 RTF1Q92541 710 aaKnown RBP6.41□□□□□ -1.38
ATXN3-229ENST00000554672 DPF2Q92785 391 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 PHACTR3Q96KR7 559 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 PRIMPOLQ96LW4 560 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 CSRNP1Q96S65 589 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 ZMIZ1Q9ULJ6 1067 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 CCDC88AQ3V6T2 1871 aa6.41□□□□□ -1.38
ATXN3-229ENST00000554672 HTATSF1O43719 755 aaKnown RBP6.4□□□□□ -1.38
ATXN3-229ENST00000554672 RAD17O75943 681 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 ARSDP51689 593 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 KIAA2012Q0VF49 1180 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 TAF7Q15545 349 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-229ENST00000554672 OCLNQ16625 522 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 FOXD4L6Q3SYB3 417 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-229ENST00000554672 DPP8Q6V1X1 898 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-229ENST00000554672 FOXD4L3Q6VB84 417 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-229ENST00000554672 KIF6Q6ZMV9 814 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 KRT26Q7Z3Y9 468 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 PPP1R42Q7Z4L9 355 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 FAM35AQ86V20 835 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 DMRTC2Q8IXT2 367 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-229ENST00000554672 ZNF34Q8IZ26 560 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 NGEFQ8N5V2 710 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 DCPSQ96C86 337 aaKnown RBP6.4□□□□□ -1.38
ATXN3-229ENST00000554672 LPIN3Q9BQK8 851 aa6.4□□□□□ -1.38
ATXN3-229ENST00000554672 NOVA2Q9UNW9 492 aaKnown RBP6.4□□□□□ -1.38
ATXN3-229ENST00000554672 ANKRD31Q8N7Z5 1873 aa6.4□□□□□ -1.39
ATXN3-229ENST00000554672 RGS9O75916 674 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-229ENST00000554672 CPB1P15086 417 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 ELNP15502 786 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 EPB42P16452 691 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 GPTP24298 496 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 PRKAR2BP31323 418 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 ADGRE1Q14246 886 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 MBTPS1Q14703 1052 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 FAM26DQ5JW98 314 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 PERM1Q5SV97 790 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 CC2D1BQ5T0F9 858 aaKnown RBP6.39□□□□□ -1.39
ATXN3-229ENST00000554672 DLK2Q6UY11 383 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 DHX32Q7L7V1 743 aaKnown RBP6.39□□□□□ -1.39
ATXN3-229ENST00000554672 LENG1Q96BZ8 264 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-229ENST00000554672 NACC1Q96RE7 527 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 SAP130Q9H0E3 1048 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 C11orf16Q9NQ32 467 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 HDAC9Q9UKV0 1011 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 RRP7AQ9Y3A4 280 aaKnown RBP6.39□□□□□ -1.39
ATXN3-229ENST00000554672 MAP3K15Q6ZN16 1313 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 ABCC12Q96J65 1359 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 THSD7BQ9C0I4 1608 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 COL11A2P13942 1736 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-229ENST00000554672 SCN11AQ9UI33 1791 aa6.39□□□□□ -1.39
ATXN3-229ENST00000554672 C9orf172C9J069 976 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 DYRK3O43781 588 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 NTSR2O95665 410 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 EGFRP00533 1210 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 RPS12P25398 132 aaKnown RBP6.38□□□□□ -1.39
ATXN3-229ENST00000554672 HABP4Q5JVS0 413 aaKnown RBP6.38□□□□□ -1.39
ATXN3-229ENST00000554672 CAPN12Q6ZSI9 719 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 TTLL7Q6ZT98 887 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 MCM10Q7L590 875 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 SLC51AQ86UW1 340 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 TREML1Q86YW5 311 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 PNISRQ8TF01 805 aaKnown RBP6.38□□□□□ -1.39
ATXN3-229ENST00000554672 VTI1AQ96AJ9 217 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 UTP14AQ9BVJ6 771 aaKnown RBP6.38□□□□□ -1.39
ATXN3-229ENST00000554672 NUDCQ9Y266 331 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 KCNMB2Q9Y691 235 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 IBTKQ9P2D0 1353 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-229ENST00000554672 COL4A5P29400 1685 aa6.38□□□□□ -1.39
ATXN3-229ENST00000554672 RIC1Q4ADV7 1423 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 ABCC4O15439 1325 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 UBN2Q6ZU65 1347 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 SHTN1A0MZ66 631 aa6.37□□□□□ -1.39
ATXN3-229ENST00000554672 YDJCA8MPS7 323 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms