RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 EDC4Q6P2E9 1401 aaKnown RBP6.78□□□□□ -1.32
ATXN3-228ENST00000554592 NSD3Q9BZ95 1437 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 SOX1O00570 391 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-228ENST00000554592 DDX3YO15523 660 aaKnown RBP6.78□□□□□ -1.32
ATXN3-228ENST00000554592 P4HBP07237 508 aaKnown RBP6.78□□□□□ -1.32
ATXN3-228ENST00000554592 MMP10P09238 476 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 FBLN1P23142 703 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 FMR1Q06787 632 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATXN3-228ENST00000554592 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 KIAA1211Q6ZU35 1233 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 SMIM5Q71RC9 77 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
ATXN3-228ENST00000554592 GIPC2Q8TF65 315 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 PIGBQ92521 554 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 ALKBH8Q96BT7 664 aaKnown RBP6.78□□□□□ -1.32
ATXN3-228ENST00000554592 TCF12Q99081 682 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 OSGEPQ9NPF4 335 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 SEC31BQ9NQW1 1179 aa6.78□□□□□ -1.32
ATXN3-228ENST00000554592 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
ATXN3-228ENST00000554592 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.32
ATXN3-228ENST00000554592 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.32
ATXN3-228ENST00000554592 METTL12A8MUP2 240 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 CYP27B1O15528 508 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 DPEP1P16444 411 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 TMF1P82094 1093 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 PLCB3Q01970 1234 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 KIAA0319Q5VV43 1072 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 CCNJLQ8IV13 435 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 USHBP1Q8N6Y0 703 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
ATXN3-228ENST00000554592 QSER1Q2KHR3 1735 aa6.76□□□□□ -1.33
ATXN3-228ENST00000554592 WNK3Q9BYP7 1800 aa6.76□□□□□ -1.33
ATXN3-228ENST00000554592 EAPPQ56P03 285 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-228ENST00000554592 FAM117BQ6P1L5 589 aa6.76□□□□□ -1.33
ATXN3-228ENST00000554592 UBL7Q96S82 380 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-228ENST00000554592 CARD11Q9BXL7 1154 aa6.76□□□□□ -1.33
ATXN3-228ENST00000554592 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
ATXN3-228ENST00000554592 CD163L1Q9NR16 1453 aa6.76□□□□□ -1.33
ATXN3-228ENST00000554592 QRICH2Q9H0J4 1663 aa6.76□□□□□ -1.33
ATXN3-228ENST00000554592 MEGF6O75095 1541 aa6.76□□□□□ -1.33
ATXN3-228ENST00000554592 A0A1W2PP64 1363 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
ATXN3-228ENST00000554592 NEFLP07196 543 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-228ENST00000554592 KCNA3P22001 575 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 GRIA4P48058 902 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 CABP4P57796 275 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 ITPK1Q13572 414 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 RRS1Q15050 365 aaKnown RBP6.75□□□□□ -1.33
ATXN3-228ENST00000554592 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
ATXN3-228ENST00000554592 UBASH3BQ8TF42 649 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 SIN3AQ96ST3 1273 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 DNAJC25Q9H1X3 360 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 TMOD3Q9NYL9 352 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
ATXN3-228ENST00000554592 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 PLEKHG2Q9H7P9 1386 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 E9PSI1 815 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 EIF1AYO14602 144 aaKnown RBP6.74□□□□□ -1.33
ATXN3-228ENST00000554592 FYB1O15117 783 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-228ENST00000554592 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-228ENST00000554592 RFC4P35249 363 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 MAPK8P45983 427 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 SPRED3Q2MJR0 410 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 PRSS36Q5K4E3 855 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 ACAD11Q709F0 780 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 ASAP3Q8TDY4 903 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 NRSN2Q9GZP1 204 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-228ENST00000554592 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-228ENST00000554592 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
ATXN3-228ENST00000554592 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
ATXN3-228ENST00000554592 KAT6BQ8WYB5 2073 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 RTL1A6NKG5 1358 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 A0A096LPE4 126 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 GYS1P13807 737 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-228ENST00000554592 C19orf57Q0VDD7 668 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 IKBKEQ14164 716 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 ARMC10Q8N2F6 343 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 SLC7A3Q8WY07 619 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 CSRNP1Q96S65 589 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 SETDB2Q96T68 719 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 LY75O60449 1722 aa6.73□□□□□ -1.33
ATXN3-228ENST00000554592 INSRP06213 1382 aa6.72□□□□□ -1.33
ATXN3-228ENST00000554592 FAM177BA6PVY3 158 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms