RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 GLIS2Q9BZE0 524 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-206ENST00000554429 ANO2Q9NQ90 1003 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 HYPKQ9NX55 129 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 RAI14Q9P0K7 980 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 PPP2R3BQ9Y5P8 575 aa3.23□□□□□ -1.89
PRPF39-206ENST00000554429 PSMD14O00487 310 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 DLL1O00548 723 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 PCCAP05165 728 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 HMGN5P82970 282 aaKnown RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 ZBED6P86452 979 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 AMPD3Q01432 767 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 DGKZQ13574 1117 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 SIM2Q14190 667 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 AMHR2Q16671 573 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 PLA2G2CQ5R387 149 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 PCGF5Q86SE9 256 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 ZBTB38Q8NAP3 1195 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 CUEDC1Q9NWM3 386 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 IP6K2Q9UHH9 426 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 CBFA2T2O43439 604 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 ECE2O60344 883 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 RNF40O75150 1001 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 ARHGEF15O94989 841 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 ATP2B4P23634 1241 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 TMPOP42166 694 aaKnown RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 CCT2P78371 535 aaKnown RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 GPSM2P81274 684 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 DCTN1Q14203 1278 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 WASHC4Q2M389 1173 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 SLC4A8Q2Y0W8 1093 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 UVSSAQ2YD98 709 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 LDLRAD1Q5T700 205 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 RSBN1LQ6PCB5 846 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 CCDC174Q6PII3 467 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 GALNT6Q8NCL4 622 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 TBC1D16Q8TBP0 767 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 CDCA5Q96FF9 252 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 AGBL1Q96MI9 1066 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 CSRNP1Q96S65 589 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 IFT122Q9HBG6 1241 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 CWC25Q9NXE8 425 aaPredicted RBP3.22□□□□□ -1.89
PRPF39-206ENST00000554429 FAM13BQ9NYF5 915 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 POLLQ9UGP5 575 aa3.22□□□□□ -1.89
PRPF39-206ENST00000554429 MGAMO43451 1857 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 TNFRSF10BO14763 440 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 ALDH1A1P00352 501 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 FGAP02671 866 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 PIP4K2AP48426 406 aaPredicted RBP3.21□□□□□ -1.89
PRPF39-206ENST00000554429 INHBEP58166 350 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 SATB1Q01826 763 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 KIF23Q02241 960 aaPredicted RBP3.21□□□□□ -1.89
PRPF39-206ENST00000554429 PROSER3Q2NL68 480 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 KIF4BQ2VIQ3 1234 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 PLA2G4EQ3MJ16 856 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 INTS3Q68E01 1043 aaKnown RBP3.21□□□□□ -1.89
PRPF39-206ENST00000554429 PODNQ7Z5L7 613 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 USP48Q86UV5 1035 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 MICALL1Q8N3F8 863 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 CHCHD4Q8N4Q1 142 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 CCDC191Q8NCU4 936 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 VPS37AQ8NEZ2 397 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 XAGE3Q8WTP9 111 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 DCPSQ96C86 337 aaKnown RBP3.21□□□□□ -1.89
PRPF39-206ENST00000554429 SLC39A13Q96H72 371 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 CCDC34Q96HJ3 373 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 SNX27Q96L92 541 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 FAM161BQ96MY7 647 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 CD248Q9HCU0 757 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 ZCCHC17Q9NP64 241 aaKnown RBP3.21□□□□□ -1.89
PRPF39-206ENST00000554429 DBF4Q9UBU7 674 aaPredicted RBP3.21□□□□□ -1.89
PRPF39-206ENST00000554429 TSPYL4Q9UJ04 414 aa3.21□□□□□ -1.89
PRPF39-206ENST00000554429 XDHP47989 1333 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 MPHOSPH10O00566 681 aaKnown RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 PPP1R12AO14974 1030 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 PPFIA3O75145 1194 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 HSP90AA1P07900 732 aaKnown RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 PDGFRBP09619 1106 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 GNALP38405 381 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 HUNKP57058 714 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 RPS8P62241 208 aaKnown RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 LRRC41Q15345 812 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 SLFNL1Q499Z3 407 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 SH3D19Q5HYK7 790 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF746Q6NUN9 644 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 PPP4R4Q6NUP7 873 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 FBXO46Q6PJ61 603 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 COPS6Q7L5N1 327 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 KRT26Q7Z3Y9 468 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ARMC5Q96C12 935 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 PPP1R12CQ9BZL4 782 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ACBD3Q9H3P7 528 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ZBTB3Q9H5J0 574 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 NOL7Q9UMY1 257 aaKnown RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 LZTS1Q9Y250 596 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 BICDL2A1A5D9 508 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 PALM3A6NDB9 673 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-206ENST00000554429 CCDC85CA6NKD9 419 aa3.21□□□□□ -1.9
PRPF39-206ENST00000554429 ZBTB24O43167 697 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms