RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 MYBPC3Q14896 1274 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 QPCTQ16769 361 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 PAPD7Q5XG87 772 aaKnown RBP10.68□□□□□ -0.7
SIX4-202ENST00000554079 PPP4R3AQ6IN85 833 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 AGAP11Q8TF27 550 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 CAVIN3Q969G5 261 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 HVCN1Q96D96 273 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 BICD1Q96G01 975 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 LZTS2Q9BRK4 669 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 OSBPL1AQ9BXW6 950 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 RMI1Q9H9A7 625 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.68□□□□□ -0.7
SIX4-202ENST00000554079 WDR35Q9P2L0 1181 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 HDAC6Q9UBN7 1215 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 LEMD3Q9Y2U8 911 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 SALL1Q9NSC2 1324 aa10.68□□□□□ -0.7
SIX4-202ENST00000554079 CEP170BQ9Y4F5 1589 aaPredicted RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 MED23Q9ULK4 1368 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 A0A1B0GTH6 734 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 DPPA5A6NC42 116 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 CHL1O00533 1208 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 DIAPH2O60879 1101 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 SMIM24O75264 130 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 GLRX3O76003 335 aaKnown RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 LUC7L3O95232 432 aaKnown RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 NPTXRO95502 500 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 CDC27P30260 824 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 PBX1P40424 430 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 RBL2Q08999 1139 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 SAFB2Q14151 953 aaKnown RBP eCLIP10.67□□□□□ -0.7
SIX4-202ENST00000554079 HSP90AA4PQ58FG1 418 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 KCTD16Q68DU8 428 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 HIBCHQ6NVY1 386 aaPredicted RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 OLFM4Q6UX06 510 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 RINLQ6ZS11 566 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 APLFQ8IW19 511 aaPredicted RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 KCNG4Q8TDN1 519 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 DTNBP1Q96EV8 351 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 RUFY1Q96T51 708 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 TRIM4Q9C037 500 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 KCNMB3Q9NPA1 279 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 BIN2Q9UBW5 565 aaPredicted RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 CLIC4Q9Y696 253 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 MYO5AQ9Y4I1 1855 aaKnown RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 UBN2Q6ZU65 1347 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 AKAP12Q02952 1782 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 ECM29Q5VYK3 1845 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 PDE2AO00408 941 aaPredicted RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 ATP1A1P05023 1023 aaKnown RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 BMP6P22004 513 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 CMA1P23946 247 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 MAGEA10P43363 369 aaPredicted RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 GNAQP50148 359 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 EPHB4P54760 987 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 SFSWAPQ12872 951 aaKnown RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 RASA3Q14644 834 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 STK38Q15208 465 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 CCDC57Q2TAC2 916 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 CCDC38Q502W7 563 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 C1orf131Q8NDD1 294 aaKnown RBP10.67□□□□□ -0.7
SIX4-202ENST00000554079 TEKT4Q8WW24 435 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 SEC16BQ96JE7 1060 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 PCMTD2Q9NV79 361 aa10.67□□□□□ -0.7
SIX4-202ENST00000554079 MYH1P12882 1939 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 RBM47A0AV96 593 aaKnown RBP10.66□□□□□ -0.7
SIX4-202ENST00000554079 SPDYE5A6NIY4 337 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 ZNF233A6NK53 670 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 RASSF10A6NK89 507 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 SRGAP2O75044 1071 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 ERVK-24P63145 666 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 PNOCQ13519 176 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 GLE1Q53GS7 698 aaKnown RBP10.66□□□□□ -0.7
SIX4-202ENST00000554079 ACBD5Q5T8D3 534 aaPredicted RBP10.66□□□□□ -0.7
SIX4-202ENST00000554079 EMBQ6PCB8 327 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 APTXQ7Z2E3 356 aaKnown RBP10.66□□□□□ -0.7
SIX4-202ENST00000554079 CD302Q8IX05 232 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 C14orf93Q9H972 538 aaKnown RBP10.66□□□□□ -0.7
SIX4-202ENST00000554079 POLR3EQ9NVU0 708 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 PHF24Q9UPV7 400 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 SAR1BQ9Y6B6 198 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 NRKQ7Z2Y5 1582 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 ZMYM6O95789 1325 aa10.66□□□□□ -0.7
SIX4-202ENST00000554079 PTPDC1A2A3K4 754 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 STXBP3O00186 592 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 ABLIM1O14639 778 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 SPTLC2O15270 562 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 TEX33O43247 280 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 ATP6V1G1O75348 118 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 KRT14P02533 472 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 TNFRSF8P28908 595 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 ALDH3A1P30838 453 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 IL13P35225 146 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 CCNG1P51959 295 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 FMR1Q06787 632 aaKnown RBP eCLIP10.65□□□□□ -0.7
SIX4-202ENST00000554079 C2orf54Q08AI8 447 aa10.65□□□□□ -0.7
SIX4-202ENST00000554079 NMIQ13287 307 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms