RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 PORCNQ9H237 461 aa21.19■□□□□ 0.98
FOXN3-204ENST00000553840 MKNK2Q9HBH9 465 aa21.19■□□□□ 0.98
FOXN3-204ENST00000553840 TMX2Q9Y320 296 aa21.19■□□□□ 0.98
FOXN3-204ENST00000553840 RGS2P41220 211 aa21.18■□□□□ 0.98
FOXN3-204ENST00000553840 ATP2B2Q01814 1243 aa21.18■□□□□ 0.98
FOXN3-204ENST00000553840 WDR78Q5VTH9 848 aa21.18■□□□□ 0.98
FOXN3-204ENST00000553840 DEFB118Q96PH6 123 aa21.18■□□□□ 0.98
FOXN3-204ENST00000553840 IVNS1ABPQ9Y6Y0 642 aa21.18■□□□□ 0.98
FOXN3-204ENST00000553840 BRCA2P51587 3418 aa21.17■□□□□ 0.98
FOXN3-204ENST00000553840 SPDYE16A6NNV3 312 aaPredicted RBP21.17■□□□□ 0.98
FOXN3-204ENST00000553840 PATL2C9JE40 543 aaKnown RBP21.17■□□□□ 0.98
FOXN3-204ENST00000553840 M0R2C6 588 aa21.17■□□□□ 0.98
FOXN3-204ENST00000553840 TFRCP02786 760 aaKnown RBP21.17■□□□□ 0.98
FOXN3-204ENST00000553840 RWDD1Q9H446 243 aaPredicted RBP21.17■□□□□ 0.98
FOXN3-204ENST00000553840 VCPKMTQ9H867 229 aa21.17■□□□□ 0.98
FOXN3-204ENST00000553840 GOPCQ9HD26 462 aa21.17■□□□□ 0.98
FOXN3-204ENST00000553840 HMX1Q9NP08 348 aaPredicted RBP21.17■□□□□ 0.98
FOXN3-204ENST00000553840 PAK6Q9NQU5 681 aaPredicted RBP21.17■□□□□ 0.98
FOXN3-204ENST00000553840 RPTORQ8N122 1335 aa21.17■□□□□ 0.98
FOXN3-204ENST00000553840 SMIM22K7EJ46 135 aa21.16■□□□□ 0.98
FOXN3-204ENST00000553840 WDR46O15213 610 aaKnown RBP21.16■□□□□ 0.98
FOXN3-204ENST00000553840 CNMDO75829 334 aa21.16■□□□□ 0.98
FOXN3-204ENST00000553840 EEF2P13639 858 aaKnown RBP21.16■□□□□ 0.98
FOXN3-204ENST00000553840 CLEC10AQ8IUN9 316 aa21.16■□□□□ 0.98
FOXN3-204ENST00000553840 HTATIP2Q9BUP3 242 aa21.16■□□□□ 0.98
FOXN3-204ENST00000553840 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.16■□□□□ 0.98
FOXN3-204ENST00000553840 ROBO3Q96MS0 1386 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 SALL3Q9BXA9 1300 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 FARP2O94887 1054 aaPredicted RBP21.15■□□□□ 0.98
FOXN3-204ENST00000553840 ZKSCAN1P17029 563 aaPredicted RBP21.15■□□□□ 0.98
FOXN3-204ENST00000553840 ZMYM1Q5SVZ6 1142 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 MORN1Q5T089 497 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 POTEEQ6S8J3 1075 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 SIAH1Q8IUQ4 282 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 IFNL3Q8IZI9 196 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 ZNF444Q8N0Y2 327 aaPredicted RBP21.15■□□□□ 0.98
FOXN3-204ENST00000553840 SPICE1Q8N0Z3 855 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 MB21D1Q8N884 522 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 TRIB2Q92519 343 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 EVI5LQ96CN4 794 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 APBA2Q99767 749 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 BTBD7Q9P203 1132 aa21.15■□□□□ 0.98
FOXN3-204ENST00000553840 FLOT1O75955 427 aa21.14■□□□□ 0.97
FOXN3-204ENST00000553840 SLC3A2P08195 630 aaKnown RBP21.14■□□□□ 0.97
FOXN3-204ENST00000553840 STK11IPQ8N1F8 1099 aa21.14■□□□□ 0.97
FOXN3-204ENST00000553840 STAP2Q9UGK3 403 aa21.14■□□□□ 0.97
FOXN3-204ENST00000553840 SLC15A5A6NIM6 579 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 RAD21O60216 631 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 RASA1P20936 1047 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 PTPREP23469 700 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 DSG3P32926 999 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 PDE1AP54750 535 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 PDE4BQ07343 736 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 MAP2K5Q13163 448 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 USP6NLQ92738 828 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 DPF3Q92784 378 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 SEC62Q99442 399 aaKnown RBP21.13■□□□□ 0.97
FOXN3-204ENST00000553840 NAPBQ9H115 298 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 EPB41L4AQ9HCS5 686 aaPredicted RBP21.13■□□□□ 0.97
FOXN3-204ENST00000553840 RLFQ13129 1914 aa21.13■□□□□ 0.97
FOXN3-204ENST00000553840 GREB1LQ9C091 1923 aaPredicted RBP21.13■□□□□ 0.97
FOXN3-204ENST00000553840 CRISPLD2Q9H0B8 497 aa21.12■□□□□ 0.97
FOXN3-204ENST00000553840 PARP14Q460N5 1801 aa21.12■□□□□ 0.97
FOXN3-204ENST00000553840 A0A0G2JMZ2 1700 aa21.12■□□□□ 0.97
FOXN3-204ENST00000553840 MKI67P46013 3256 aaKnown RBP21.12■□□□□ 0.97
FOXN3-204ENST00000553840 MYH4Q9Y623 1939 aa21.12■□□□□ 0.97
FOXN3-204ENST00000553840 STRNO43815 780 aa21.11■□□□□ 0.97
FOXN3-204ENST00000553840 PRKAR2AP13861 404 aaKnown RBP21.11■□□□□ 0.97
FOXN3-204ENST00000553840 TRIM32Q13049 653 aa21.11■□□□□ 0.97
FOXN3-204ENST00000553840 PLS1Q14651 629 aa21.11■□□□□ 0.97
FOXN3-204ENST00000553840 KIAA1755Q5JYT7 1200 aa21.11■□□□□ 0.97
FOXN3-204ENST00000553840 SAMD1Q6SPF0 538 aaPredicted RBP21.11■□□□□ 0.97
FOXN3-204ENST00000553840 TICAM2Q86XR7 235 aa21.11■□□□□ 0.97
FOXN3-204ENST00000553840 ANKLE1Q8NAG6 615 aa21.11■□□□□ 0.97
FOXN3-204ENST00000553840 SHCBP1Q8NEM2 672 aa21.11■□□□□ 0.97
FOXN3-204ENST00000553840 SPATC1LQ9H0A9 340 aa21.11■□□□□ 0.97
FOXN3-204ENST00000553840 MAP3K21Q5TCX8 1036 aa21.1■□□□□ 0.97
FOXN3-204ENST00000553840 UBE2Q1Q7Z7E8 422 aa21.1■□□□□ 0.97
FOXN3-204ENST00000553840 MOV10L1Q9BXT6 1211 aaKnown RBP21.1■□□□□ 0.97
FOXN3-204ENST00000553840 LNPKQ9C0E8 428 aa21.1■□□□□ 0.97
FOXN3-204ENST00000553840 MROH8Q9H579 483 aa21.1■□□□□ 0.97
FOXN3-204ENST00000553840 NYAP2Q9P242 653 aa21.1■□□□□ 0.97
FOXN3-204ENST00000553840 GRB14Q14449 540 aa21.09■□□□□ 0.97
FOXN3-204ENST00000553840 MFSD14CQ5VZR4 134 aa21.09■□□□□ 0.97
FOXN3-204ENST00000553840 B4GALNT3Q6L9W6 998 aa21.09■□□□□ 0.97
FOXN3-204ENST00000553840 DPP9Q86TI2 863 aa21.09■□□□□ 0.97
FOXN3-204ENST00000553840 SMC5Q8IY18 1101 aa21.09■□□□□ 0.97
FOXN3-204ENST00000553840 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.09■□□□□ 0.97
FOXN3-204ENST00000553840 HELLSQ9NRZ9 838 aa21.09■□□□□ 0.97
FOXN3-204ENST00000553840 SLC5A4Q9NY91 659 aa21.09■□□□□ 0.97
FOXN3-204ENST00000553840 COL11A1P12107 1806 aaPredicted RBP21.08■□□□□ 0.97
FOXN3-204ENST00000553840 TRIM6-TRIM34B2RNG4 842 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 PRDM1O75626 825 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 TSPY3P0CV98 308 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 TSPY8P0CW00 308 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 PPARAQ07869 468 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 CACNB2Q08289 660 aaPredicted RBP21.08■□□□□ 0.97
FOXN3-204ENST00000553840 CCL14Q16627 93 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 NECAB2Q7Z6G3 386 aa21.08■□□□□ 0.97
FOXN3-204ENST00000553840 EXOC6Q8TAG9 804 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms