RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NMT2O60551 498 aa16.3■□□□□ 0.2
TUBB3-202ENST00000553656 VCAM1P19320 739 aa16.3■□□□□ 0.2
TUBB3-202ENST00000553656 SART3Q15020 963 aaKnown RBP16.3■□□□□ 0.2
TUBB3-202ENST00000553656 TREML2Q5T2D2 321 aa16.3■□□□□ 0.2
TUBB3-202ENST00000553656 GPAT2Q6NUI2 795 aa16.3■□□□□ 0.2
TUBB3-202ENST00000553656 SIAH1Q8IUQ4 282 aa16.3■□□□□ 0.2
TUBB3-202ENST00000553656 SMCR8Q8TEV9 937 aaPredicted RBP16.3■□□□□ 0.2
TUBB3-202ENST00000553656 IL17RBQ9NRM6 502 aa16.3■□□□□ 0.2
TUBB3-202ENST00000553656 ZSWIM5Q9P217 1185 aa16.3■□□□□ 0.2
TUBB3-202ENST00000553656 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
TUBB3-202ENST00000553656 ERICH2A1L162 156 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L15C9J2P7 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L13C9JLJ4 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L11C9JVI0 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L18D6R9N7 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L22D6RA61 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L17D6RBQ6 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L19D6RCP7 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L20D6RJB6 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
TUBB3-202ENST00000553656 HSPA4P34932 840 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 USP17L24Q0WX57 530 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 STOX1Q6ZVD7 989 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 SPICE1Q8N0Z3 855 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 MKL1Q969V6 931 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 TTC14Q96N46 770 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 ZSCAN10Q96SZ4 725 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-202ENST00000553656 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 TANGO6Q9C0B7 1094 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 RPAP3Q9H6T3 665 aaPredicted RBP16.29■□□□□ 0.2
TUBB3-202ENST00000553656 ISY1Q9ULR0 285 aaKnown RBP16.29■□□□□ 0.2
TUBB3-202ENST00000553656 TAF6LQ9Y6J9 622 aa16.29■□□□□ 0.2
TUBB3-202ENST00000553656 TNKSO95271 1327 aa16.28■□□□□ 0.2
TUBB3-202ENST00000553656 F5H6K3 240 aa16.28■□□□□ 0.2
TUBB3-202ENST00000553656 WDR46O15213 610 aaKnown RBP16.28■□□□□ 0.2
TUBB3-202ENST00000553656 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
TUBB3-202ENST00000553656 KLRC3Q07444 240 aa16.28■□□□□ 0.2
TUBB3-202ENST00000553656 CRHR2Q13324 411 aa16.28■□□□□ 0.2
TUBB3-202ENST00000553656 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
TUBB3-202ENST00000553656 MYH4Q9Y623 1939 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 FOXN1O15353 648 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 NDUFB10O96000 172 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 HOXA7P31268 230 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-202ENST00000553656 MCM5P33992 734 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 SLFN13Q68D06 897 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 DGKHQ86XP1 1220 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 GMCL1P1Q8NEA9 526 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 CFHR5Q9BXR6 569 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 USP26Q9BXU7 913 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
TUBB3-202ENST00000553656 KAT14Q9H8E8 782 aa16.27■□□□□ 0.2
TUBB3-202ENST00000553656 IFIT3O14879 490 aaKnown RBP16.26■□□□□ 0.19
TUBB3-202ENST00000553656 CYP2C8P10632 490 aa16.26■□□□□ 0.19
TUBB3-202ENST00000553656 NOVP48745 357 aa16.26■□□□□ 0.19
TUBB3-202ENST00000553656 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
TUBB3-202ENST00000553656 IFIT1BQ5T764 474 aaKnown RBP16.26■□□□□ 0.19
TUBB3-202ENST00000553656 CYB5R4Q7L1T6 521 aa16.26■□□□□ 0.19
TUBB3-202ENST00000553656 MB21D2Q8IYB1 491 aaPredicted RBP16.26■□□□□ 0.19
TUBB3-202ENST00000553656 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
TUBB3-202ENST00000553656 TMEM47Q9BQJ4 181 aa16.26■□□□□ 0.19
TUBB3-202ENST00000553656 MTMR7Q9Y216 660 aa16.26■□□□□ 0.19
TUBB3-202ENST00000553656 PRC1O43663 620 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 TLR2O60603 784 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 FLOT1O75955 427 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 HMGB1P09429 215 aaKnown RBP16.25■□□□□ 0.19
TUBB3-202ENST00000553656 SLC1A4P43007 532 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 GCLCP48506 637 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-202ENST00000553656 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 TMEM67Q5HYA8 995 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 FAM83BQ5T0W9 1011 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 CATSPERGQ6ZRH7 1159 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 RASEFQ8IZ41 740 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 ENAHQ8N8S7 591 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-202ENST00000553656 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
TUBB3-202ENST00000553656 GTF3C2Q8WUA4 911 aaPredicted RBP16.25■□□□□ 0.19
TUBB3-202ENST00000553656 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
TUBB3-202ENST00000553656 PSMA5P28066 241 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 WTAPQ15007 396 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 CCDC96Q2M329 555 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 KIAA1755Q5JYT7 1200 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 RCSD1Q6JBY9 416 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
TUBB3-202ENST00000553656 CHST3Q7LGC8 479 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 KCNB2Q92953 911 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 JAKMIP1Q96N16 626 aaKnown RBP16.24■□□□□ 0.19
TUBB3-202ENST00000553656 NUP88Q99567 741 aaPredicted RBP16.24■□□□□ 0.19
TUBB3-202ENST00000553656 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
TUBB3-202ENST00000553656 GPR25O00155 361 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 BMP3P12645 472 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 LBX1P52954 281 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 HERVK_113P62684 666 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 FGD1P98174 961 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 IKQ13123 557 aaPredicted RBP16.23■□□□□ 0.19
TUBB3-202ENST00000553656 COG2Q14746 738 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 NOM1Q5C9Z4 860 aaKnown RBP16.23■□□□□ 0.19
TUBB3-202ENST00000553656 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
TUBB3-202ENST00000553656 PNMA1Q8ND90 353 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms