RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 GABRQQ9UN88 632 aa12.18□□□□□ -0.46
LINC00517-201ENST00000553396 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
LINC00517-201ENST00000553396 PARP14Q460N5 1801 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 EEF2P13639 858 aaKnown RBP12.17□□□□□ -0.46
LINC00517-201ENST00000553396 PRMT2P55345 433 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 PPARAQ07869 468 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 KIAA1755Q5JYT7 1200 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 ZNF589Q86UQ0 364 aaPredicted RBP12.17□□□□□ -0.46
LINC00517-201ENST00000553396 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 SPICE1Q8N0Z3 855 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 ARMC5Q96C12 935 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 TANGO6Q9C0B7 1094 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 BRCA2P51587 3418 aa12.17□□□□□ -0.46
LINC00517-201ENST00000553396 PLXNB2O15031 1838 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 RLFQ13129 1914 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 RAD21O60216 631 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 SDSP20132 328 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 FLT3LGP49771 235 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 CTDSPL2Q05D32 466 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 MCMDC2Q4G0Z9 681 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 CATSPERGQ6ZRH7 1159 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 NBPF11Q86T75 865 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 COA7Q96BR5 231 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 ZNF333Q96JL9 665 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC00517-201ENST00000553396 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 KANSL2Q9H9L4 492 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 RBPJLQ9UBG7 517 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 MORF4L1Q9UBU8 362 aa12.16□□□□□ -0.46
LINC00517-201ENST00000553396 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.46
LINC00517-201ENST00000553396 ERVK-9P63128 1117 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 ERVK-24P63145 666 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 MLLT1Q03111 559 aaPredicted RBP12.15□□□□□ -0.46
LINC00517-201ENST00000553396 POTEEQ6S8J3 1075 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
LINC00517-201ENST00000553396 ZNF444Q8N0Y2 327 aaPredicted RBP12.15□□□□□ -0.46
LINC00517-201ENST00000553396 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 VCPKMTQ9H867 229 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 DIAPH3Q9NSV4 1193 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 TMX2Q9Y320 296 aa12.15□□□□□ -0.46
LINC00517-201ENST00000553396 COL11A1P12107 1806 aaPredicted RBP12.15□□□□□ -0.46
LINC00517-201ENST00000553396 CCDC171Q6TFL3 1326 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 PDE4DIPQ5VU43 2346 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
LINC00517-201ENST00000553396 CNMDO75829 334 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 ELNP15502 786 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 GRK4P32298 578 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 RGS19P49795 217 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 PDE4BQ07343 736 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 Q3C1V9 767 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 FAM47AQ5JRC9 791 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 TTC22Q5TAA0 569 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
LINC00517-201ENST00000553396 GTF3C2Q8WUA4 911 aaPredicted RBP12.14□□□□□ -0.47
LINC00517-201ENST00000553396 LPAR1Q92633 364 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 PORCNQ9H237 461 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
LINC00517-201ENST00000553396 BIN2Q9UBW5 565 aaPredicted RBP12.14□□□□□ -0.47
LINC00517-201ENST00000553396 ADCY3O60266 1144 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 FLOT1O75955 427 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 HSPD1P10809 573 aaKnown RBP12.13□□□□□ -0.47
LINC00517-201ENST00000553396 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
LINC00517-201ENST00000553396 MTFR1Q15390 333 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 WDR78Q5VTH9 848 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 TICAM2Q86XR7 235 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 CEP95Q96GE4 821 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
LINC00517-201ENST00000553396 INCENPQ9NQS7 918 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 TOMM22Q9NS69 142 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 BTBD7Q9P203 1132 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 RABGAP1Q9Y3P9 1069 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 PLIN4Q96Q06 1357 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 LAMA4Q16363 1823 aa12.13□□□□□ -0.47
LINC00517-201ENST00000553396 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
LINC00517-201ENST00000553396 FGAP02671 866 aa12.12□□□□□ -0.47
LINC00517-201ENST00000553396 HAND2P61296 217 aa12.12□□□□□ -0.47
LINC00517-201ENST00000553396 TFAP4Q01664 338 aa12.12□□□□□ -0.47
LINC00517-201ENST00000553396 COG2Q14746 738 aa12.12□□□□□ -0.47
LINC00517-201ENST00000553396 FAM83BQ5T0W9 1011 aa12.12□□□□□ -0.47
LINC00517-201ENST00000553396 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
LINC00517-201ENST00000553396 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
LINC00517-201ENST00000553396 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
LINC00517-201ENST00000553396 CLIP2Q9UDT6 1046 aa12.12□□□□□ -0.47
LINC00517-201ENST00000553396 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
LINC00517-201ENST00000553396 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
LINC00517-201ENST00000553396 TSPY2A6NKD2 308 aa12.11□□□□□ -0.47
LINC00517-201ENST00000553396 HIP1O00291 1037 aa12.11□□□□□ -0.47
LINC00517-201ENST00000553396 RANBP6O60518 1105 aaKnown RBP12.11□□□□□ -0.47
LINC00517-201ENST00000553396 NDUFB10O96000 172 aa12.11□□□□□ -0.47
LINC00517-201ENST00000553396 INHAP05111 366 aa12.11□□□□□ -0.47
LINC00517-201ENST00000553396 EN2P19622 333 aaPredicted RBP12.11□□□□□ -0.47
LINC00517-201ENST00000553396 CYP2B6P20813 491 aa12.11□□□□□ -0.47
LINC00517-201ENST00000553396 MAPK4P31152 587 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms