RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 HDAC1Q13547 482 aaPredicted RBP19.03■□□□□ 0.64
CDK4-215ENST00000553237 COG2Q14746 738 aa19.03■□□□□ 0.64
CDK4-215ENST00000553237 GIMAP6Q6P9H5 292 aa19.03■□□□□ 0.64
CDK4-215ENST00000553237 SOCS4Q8WXH5 440 aa19.03■□□□□ 0.64
CDK4-215ENST00000553237 TRIB2Q92519 343 aa19.03■□□□□ 0.64
CDK4-215ENST00000553237 GCC1Q96CN9 775 aa19.03■□□□□ 0.64
CDK4-215ENST00000553237 EPB41L4AQ9HCS5 686 aaPredicted RBP19.03■□□□□ 0.64
CDK4-215ENST00000553237 EEF2P13639 858 aaKnown RBP19.02■□□□□ 0.64
CDK4-215ENST00000553237 TDO2P48775 406 aa19.02■□□□□ 0.64
CDK4-215ENST00000553237 CCNA1P78396 465 aa19.02■□□□□ 0.64
CDK4-215ENST00000553237 SAMD1Q6SPF0 538 aaPredicted RBP19.02■□□□□ 0.64
CDK4-215ENST00000553237 LBX2Q6XYB7 198 aa19.02■□□□□ 0.64
CDK4-215ENST00000553237 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.02■□□□□ 0.64
CDK4-215ENST00000553237 SH2D4AQ9H788 454 aa19.02■□□□□ 0.64
CDK4-215ENST00000553237 VCPKMTQ9H867 229 aa19.02■□□□□ 0.64
CDK4-215ENST00000553237 MKNK2Q9HBH9 465 aa19.02■□□□□ 0.64
CDK4-215ENST00000553237 PAK6Q9NQU5 681 aaPredicted RBP19.02■□□□□ 0.64
CDK4-215ENST00000553237 HOXC10Q9NYD6 342 aa19.02■□□□□ 0.64
CDK4-215ENST00000553237 SALL3Q9BXA9 1300 aa19.01■□□□□ 0.63
CDK4-215ENST00000553237 PATL2C9JE40 543 aaKnown RBP19.01■□□□□ 0.63
CDK4-215ENST00000553237 GNAT2P19087 354 aa19.01■□□□□ 0.63
CDK4-215ENST00000553237 MORN1Q5T089 497 aa19.01■□□□□ 0.63
CDK4-215ENST00000553237 LPAR1Q92633 364 aa19.01■□□□□ 0.63
CDK4-215ENST00000553237 USP6NLQ92738 828 aa19.01■□□□□ 0.63
CDK4-215ENST00000553237 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDK4-215ENST00000553237 KANSL2Q9H9L4 492 aa19.01■□□□□ 0.63
CDK4-215ENST00000553237 PLXNB2O15031 1838 aa19■□□□□ 0.63
CDK4-215ENST00000553237 RAD21O60216 631 aa19■□□□□ 0.63
CDK4-215ENST00000553237 FARP2O94887 1054 aaPredicted RBP19■□□□□ 0.63
CDK4-215ENST00000553237 XRCC5P13010 732 aaKnown RBP19■□□□□ 0.63
CDK4-215ENST00000553237 RASA1P20936 1047 aa19■□□□□ 0.63
CDK4-215ENST00000553237 RGS2P41220 211 aa19■□□□□ 0.63
CDK4-215ENST00000553237 CCL14Q16627 93 aa19■□□□□ 0.63
CDK4-215ENST00000553237 ZMYM1Q5SVZ6 1142 aa19■□□□□ 0.63
CDK4-215ENST00000553237 UBE2Q1Q7Z7E8 422 aa19■□□□□ 0.63
CDK4-215ENST00000553237 IFNL3Q8IZI9 196 aa19■□□□□ 0.63
CDK4-215ENST00000553237 DPF3Q92784 378 aa19■□□□□ 0.63
CDK4-215ENST00000553237 HMX1Q9NP08 348 aaPredicted RBP19■□□□□ 0.63
CDK4-215ENST00000553237 RPTORQ8N122 1335 aa19■□□□□ 0.63
CDK4-215ENST00000553237 PRDM1O75626 825 aa18.99■□□□□ 0.63
CDK4-215ENST00000553237 FLOT1O75955 427 aa18.99■□□□□ 0.63
CDK4-215ENST00000553237 ZKSCAN1P17029 563 aaPredicted RBP18.99■□□□□ 0.63
CDK4-215ENST00000553237 PDE1AP54750 535 aa18.99■□□□□ 0.63
CDK4-215ENST00000553237 B4GALNT3Q6L9W6 998 aa18.99■□□□□ 0.63
CDK4-215ENST00000553237 EXOC6Q8TAG9 804 aa18.99■□□□□ 0.63
CDK4-215ENST00000553237 SUPT16HQ9Y5B9 1047 aaKnown RBP18.99■□□□□ 0.63
CDK4-215ENST00000553237 MYH8P13535 1937 aa18.99■□□□□ 0.63
CDK4-215ENST00000553237 PRKAR2AP13861 404 aaKnown RBP18.98■□□□□ 0.63
CDK4-215ENST00000553237 PTPREP23469 700 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 DSG3P32926 999 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 MAP2K5Q13163 448 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 CCDC129Q6ZRS4 1044 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 ATG4CQ96DT6 458 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 MOV10L1Q9BXT6 1211 aaKnown RBP18.98■□□□□ 0.63
CDK4-215ENST00000553237 NACAP1Q9BZK3 213 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 LNPKQ9C0E8 428 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 CRISPLD2Q9H0B8 497 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 RWDD1Q9H446 243 aaPredicted RBP18.98■□□□□ 0.63
CDK4-215ENST00000553237 STAP2Q9UGK3 403 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 IVNS1ABPQ9Y6Y0 642 aa18.98■□□□□ 0.63
CDK4-215ENST00000553237 SLC15A5A6NIM6 579 aa18.97■□□□□ 0.63
CDK4-215ENST00000553237 WDR46O15213 610 aaKnown RBP18.97■□□□□ 0.63
CDK4-215ENST00000553237 CACNB2Q08289 660 aaPredicted RBP18.97■□□□□ 0.63
CDK4-215ENST00000553237 PLS1Q14651 629 aa18.97■□□□□ 0.63
CDK4-215ENST00000553237 MAP3K21Q5TCX8 1036 aa18.97■□□□□ 0.63
CDK4-215ENST00000553237 TRMT44Q8IYL2 757 aaKnown RBP18.97■□□□□ 0.63
CDK4-215ENST00000553237 ZNF444Q8N0Y2 327 aaPredicted RBP18.97■□□□□ 0.63
CDK4-215ENST00000553237 APBA2Q99767 749 aa18.97■□□□□ 0.63
CDK4-215ENST00000553237 SPATC1LQ9H0A9 340 aa18.97■□□□□ 0.63
CDK4-215ENST00000553237 GOPCQ9HD26 462 aa18.97■□□□□ 0.63
CDK4-215ENST00000553237 FBXO28Q9NVF7 368 aa18.97■□□□□ 0.63
CDK4-215ENST00000553237 ROBO3Q96MS0 1386 aa18.96■□□□□ 0.63
CDK4-215ENST00000553237 H0YGN5 161 aa18.96■□□□□ 0.63
CDK4-215ENST00000553237 IGHDP01880 384 aa18.96■□□□□ 0.63
CDK4-215ENST00000553237 AAMPQ13685 434 aa18.96■□□□□ 0.63
CDK4-215ENST00000553237 EVI5LQ96CN4 794 aa18.96■□□□□ 0.63
CDK4-215ENST00000553237 HTATIP2Q9BUP3 242 aa18.96■□□□□ 0.63
CDK4-215ENST00000553237 NAPBQ9H115 298 aa18.96■□□□□ 0.63
CDK4-215ENST00000553237 ERCC3P19447 782 aa18.95■□□□□ 0.62
CDK4-215ENST00000553237 GRB14Q14449 540 aa18.95■□□□□ 0.62
CDK4-215ENST00000553237 FAM83BQ5T0W9 1011 aa18.95■□□□□ 0.62
CDK4-215ENST00000553237 MB21D1Q8N884 522 aa18.95■□□□□ 0.62
CDK4-215ENST00000553237 NPLOC4Q8TAT6 608 aa18.95■□□□□ 0.62
CDK4-215ENST00000553237 PAWRQ96IZ0 340 aaKnown RBP18.95■□□□□ 0.62
CDK4-215ENST00000553237 NUP88Q99567 741 aaPredicted RBP18.95■□□□□ 0.62
CDK4-215ENST00000553237 ZNF287Q9HBT7 754 aa18.95■□□□□ 0.62
CDK4-215ENST00000553237 FLRT1Q9NZU1 646 aa18.95■□□□□ 0.62
CDK4-215ENST00000553237 CLIP2Q9UDT6 1046 aa18.95■□□□□ 0.62
CDK4-215ENST00000553237 CCND3P30281 292 aaPredicted RBP18.94■□□□□ 0.62
CDK4-215ENST00000553237 NCAPG2Q86XI2 1143 aa18.94■□□□□ 0.62
CDK4-215ENST00000553237 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
CDK4-215ENST00000553237 DIS3LQ8TF46 1054 aaKnown RBP18.94■□□□□ 0.62
CDK4-215ENST00000553237 NYAP2Q9P242 653 aa18.94■□□□□ 0.62
CDK4-215ENST00000553237 F5H6K3 240 aa18.93■□□□□ 0.62
CDK4-215ENST00000553237 CAPN2P17655 700 aa18.93■□□□□ 0.62
CDK4-215ENST00000553237 KLRC3Q07444 240 aa18.93■□□□□ 0.62
CDK4-215ENST00000553237 PPARAQ07869 468 aa18.93■□□□□ 0.62
CDK4-215ENST00000553237 TMEM132BQ14DG7 1078 aa18.93■□□□□ 0.62
CDK4-215ENST00000553237 FAM47AQ5JRC9 791 aa18.93■□□□□ 0.62
CDK4-215ENST00000553237 MFSD14CQ5VZR4 134 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms