RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 MANSC4A6NHS7 340 aaPredicted RBP9.09□□□□□ -0.95
NPAS3-213ENST00000552874 TRIM75PA6NK02 468 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 B4E1Z4 1266 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 BTBD19C9JJ37 291 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 GTF2A2P52657 109 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 TFAP4Q01664 338 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 SPP2Q13103 211 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 SNAPC2Q13487 334 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 CCL15Q16663 113 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 ADCK5Q3MIX3 580 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 CASC1Q6TDU7 716 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 ENAHQ8N8S7 591 aaPredicted RBP9.09□□□□□ -0.95
NPAS3-213ENST00000552874 PROCA1Q8NCQ7 364 aaPredicted RBP9.09□□□□□ -0.95
NPAS3-213ENST00000552874 ANKS1AQ92625 1134 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 MKL1Q969V6 931 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 KIF12Q96FN5 646 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 RNF41Q9H4P4 317 aaPredicted RBP9.09□□□□□ -0.95
NPAS3-213ENST00000552874 MKNK2Q9HBH9 465 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 ZCCHC17Q9NP64 241 aaKnown RBP9.09□□□□□ -0.95
NPAS3-213ENST00000552874 WBP1LQ9NX94 342 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 NYAP2Q9P242 653 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 SYNPO2Q9UMS6 1093 aa9.09□□□□□ -0.95
NPAS3-213ENST00000552874 MKI67P46013 3256 aaKnown RBP9.09□□□□□ -0.95
NPAS3-213ENST00000552874 KDM4AO75164 1064 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 REC8O95072 547 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 SLC3A2P08195 630 aaKnown RBP9.08□□□□□ -0.96
NPAS3-213ENST00000552874 EEF2P13639 858 aaKnown RBP9.08□□□□□ -0.96
NPAS3-213ENST00000552874 VCAM1P19320 739 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 HMGCS2P54868 508 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 CAP1Q01518 475 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 RAB3GAP1Q15042 981 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
NPAS3-213ENST00000552874 MFSD6Q6ZSS7 791 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 ANKRD23Q86SG2 305 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 IFNL1Q8IU54 200 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 R3HDMLQ9H3Y0 253 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 CNNM2Q9H8M5 875 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 KANSL2Q9H9L4 492 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 AS3MTQ9HBK9 375 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 ZNF287Q9HBT7 754 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 SENP2Q9HC62 589 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 ZSWIM5Q9P217 1185 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 AGTPBP1Q9UPW5 1226 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 SLC45A1Q9Y2W3 748 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 NID2Q14112 1375 aa9.08□□□□□ -0.96
NPAS3-213ENST00000552874 TNKSO95271 1327 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 WDR19Q8NEZ3 1342 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 USP17L10C9JJH3 530 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 MPHOSPH10O00566 681 aaKnown RBP9.07□□□□□ -0.96
NPAS3-213ENST00000552874 RANBP6O60518 1105 aaKnown RBP9.07□□□□□ -0.96
NPAS3-213ENST00000552874 NDUFB10O96000 172 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 TSPY3P0CV98 308 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 TSPY8P0CW00 308 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 SNHG28P0DPA3 235 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 CETPP11597 493 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 HOXA7P31268 230 aaPredicted RBP9.07□□□□□ -0.96
NPAS3-213ENST00000552874 NUBP1P53384 320 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 SREBF2Q12772 1141 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 KIAA1211Q6ZU35 1233 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 PAXIP1Q6ZW49 1069 aaPredicted RBP9.07□□□□□ -0.96
NPAS3-213ENST00000552874 LRRC47Q8N1G4 583 aaKnown RBP9.07□□□□□ -0.96
NPAS3-213ENST00000552874 GMCL1P1Q8NEA9 526 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 ESR2Q92731 530 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 KIF2CQ99661 725 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 AGXT2Q9BYV1 514 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 VCPKMTQ9H867 229 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 CABP5Q9NP86 173 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 GPHNQ9NQX3 736 aaPredicted RBP9.07□□□□□ -0.96
NPAS3-213ENST00000552874 SAGE1Q9NXZ1 904 aa9.07□□□□□ -0.96
NPAS3-213ENST00000552874 TSPY2A6NKD2 308 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 C19orf81C9J6K1 198 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 SH2B2O14492 632 aaPredicted RBP9.06□□□□□ -0.96
NPAS3-213ENST00000552874 ATMINO43313 823 aaPredicted RBP9.06□□□□□ -0.96
NPAS3-213ENST00000552874 TTLL1O95922 423 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 EXOSC10Q01780 885 aaKnown RBP9.06□□□□□ -0.96
NPAS3-213ENST00000552874 GRM1Q13255 1194 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 SLC35G1Q2M3R5 365 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 RRP12Q5JTH9 1297 aaKnown RBP9.06□□□□□ -0.96
NPAS3-213ENST00000552874 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 ZNF444Q8N0Y2 327 aaPredicted RBP9.06□□□□□ -0.96
NPAS3-213ENST00000552874 IGDCC4Q8TDY8 1250 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 TMEM47Q9BQJ4 181 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 ZKSCAN3Q9BRR0 538 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 MTA3Q9BTC8 594 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 KRT23Q9C075 422 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 LY9Q9HBG7 655 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 RNF186Q9NXI6 227 aa9.06□□□□□ -0.96
NPAS3-213ENST00000552874 KIAA1217Q5T5P2 1943 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 SPDYE16A6NNV3 312 aaPredicted RBP9.05□□□□□ -0.96
NPAS3-213ENST00000552874 PDHXO00330 501 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 WDR46O15213 610 aaKnown RBP9.05□□□□□ -0.96
NPAS3-213ENST00000552874 CNMDO75829 334 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 BCRP11274 1271 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 CPA1P15085 419 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 USP14P54578 494 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 INHBEP58166 350 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 CRHR2Q13324 411 aa9.05□□□□□ -0.96
NPAS3-213ENST00000552874 ZYXQ15942 572 aaKnown RBP9.05□□□□□ -0.96
NPAS3-213ENST00000552874 NOM1Q5C9Z4 860 aaKnown RBP9.05□□□□□ -0.96
NPAS3-213ENST00000552874 LBX2Q6XYB7 198 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms