RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 STX8Q9UNK0 236 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 AGTPBP1Q9UPW5 1226 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 MTMR7Q9Y216 660 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 TAF6LQ9Y6J9 622 aa11.71□□□□□ -0.53
LETMD1-234ENST00000552645 REC8O95072 547 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 CYP2C8P10632 490 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 PCP11498 1178 aaKnown RBP11.71□□□□□ -0.54
LETMD1-234ENST00000552645 MRE11P49959 708 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 GPAT2Q6NUI2 795 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 ANKRD23Q86SG2 305 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 SIAH1Q8IUQ4 282 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 LRRC47Q8N1G4 583 aaKnown RBP11.71□□□□□ -0.54
LETMD1-234ENST00000552645 PROCA1Q8NCQ7 364 aaPredicted RBP11.71□□□□□ -0.54
LETMD1-234ENST00000552645 KIAA1683Q9H0B3 1180 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 R3HDMLQ9H3Y0 253 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 MTMR4Q9NYA4 1195 aa11.71□□□□□ -0.54
LETMD1-234ENST00000552645 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-234ENST00000552645 TTLL1O95922 423 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 FGRP09769 529 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-234ENST00000552645 LBX1P52954 281 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 SH3D19Q5HYK7 790 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 CREB3L3Q68CJ9 461 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 RALYLQ86SE5 291 aaKnown RBP11.7□□□□□ -0.54
LETMD1-234ENST00000552645 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 SMCR8Q8TEV9 937 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-234ENST00000552645 KRT23Q9C075 422 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 TANGO6Q9C0B7 1094 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 CNNM2Q9H8M5 875 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 SAGE1Q9NXZ1 904 aa11.7□□□□□ -0.54
LETMD1-234ENST00000552645 PLIN4Q96Q06 1357 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 IGKV6D-41A0A0C4DH26 115 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 E7EWF7 191 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 SLC27A2O14975 620 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 VCAM1P19320 739 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 IRX3P78415 501 aaPredicted RBP11.69□□□□□ -0.54
LETMD1-234ENST00000552645 PABPC4Q13310 644 aaKnown RBP eCLIP11.69□□□□□ -0.544e-6■■■■□ 20.1
LETMD1-234ENST00000552645 RNF20Q5VTR2 975 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
LETMD1-234ENST00000552645 RPAP3Q9H6T3 665 aaPredicted RBP11.69□□□□□ -0.54
LETMD1-234ENST00000552645 GOPCQ9HD26 462 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 IL17RBQ9NRM6 502 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 ZSWIM5Q9P217 1185 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 NYAP2Q9P242 653 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 TMX2Q9Y320 296 aa11.69□□□□□ -0.54
LETMD1-234ENST00000552645 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
LETMD1-234ENST00000552645 OSBPP22059 807 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 KIAA1755Q5JYT7 1200 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 STOX1Q6ZVD7 989 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 CHST3Q7LGC8 479 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 IQCA1Q86XH1 822 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 UBAC1Q9BSL1 405 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 VCPKMTQ9H867 229 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 CPA4Q9UI42 421 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-234ENST00000552645 TERF1P54274 439 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
LETMD1-234ENST00000552645 NUP88Q99567 741 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-234ENST00000552645 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-234ENST00000552645 ZCCHC17Q9NP64 241 aaKnown RBP11.68□□□□□ -0.54
LETMD1-234ENST00000552645 ESPNB1AK53 854 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L15C9J2P7 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L13C9JLJ4 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L11C9JVI0 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L18D6R9N7 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L22D6RA61 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L17D6RBQ6 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L19D6RCP7 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L20D6RJB6 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 F5H6K3 240 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 GPR25O00155 361 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 NDUFB10O96000 172 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 KLRC3Q07444 240 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 USP17L24Q0WX57 530 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 FAM83BQ5T0W9 1011 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 CYB5R4Q7L1T6 521 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 LPAR1Q92633 364 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 C12orf42Q96LP6 360 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 ZSCAN10Q96SZ4 725 aaPredicted RBP11.67□□□□□ -0.54
LETMD1-234ENST00000552645 MAP7D2Q96T17 732 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 SLC45A1Q9Y2W3 748 aa11.67□□□□□ -0.54
LETMD1-234ENST00000552645 TLR2O60603 784 aa11.66□□□□□ -0.54
LETMD1-234ENST00000552645 FLOT1O75955 427 aa11.66□□□□□ -0.54
LETMD1-234ENST00000552645 SLFN13Q68D06 897 aa11.66□□□□□ -0.54
LETMD1-234ENST00000552645 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
LETMD1-234ENST00000552645 ZNF296Q8WUU4 475 aaPredicted RBP11.66□□□□□ -0.54
LETMD1-234ENST00000552645 P2RX7Q99572 595 aaKnown RBP11.66□□□□□ -0.54
LETMD1-234ENST00000552645 TMEM47Q9BQJ4 181 aa11.66□□□□□ -0.54
LETMD1-234ENST00000552645 TNKSO95271 1327 aa11.66□□□□□ -0.54
LETMD1-234ENST00000552645 ERICH2A1L162 156 aa11.65□□□□□ -0.54
LETMD1-234ENST00000552645 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
LETMD1-234ENST00000552645 WDR46O15213 610 aaKnown RBP11.65□□□□□ -0.54
LETMD1-234ENST00000552645 PEX10O60683 326 aa11.65□□□□□ -0.54
LETMD1-234ENST00000552645 TOP1P11387 765 aaKnown RBP11.65□□□□□ -0.54
LETMD1-234ENST00000552645 MCCP23508 829 aa11.65□□□□□ -0.54
LETMD1-234ENST00000552645 HOXA7P31268 230 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms