RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 TNFRSF25Q93038 417 aa26.78■■□□□ 1.88
NPAS3-211ENST00000551634 LIMA1Q9UHB6 759 aaKnown RBP26.78■■□□□ 1.88
NPAS3-211ENST00000551634 COL22A1Q8NFW1 1626 aaPredicted RBP26.78■■□□□ 1.88
NPAS3-211ENST00000551634 CASP14P31944 242 aa26.77■■□□□ 1.88
NPAS3-211ENST00000551634 CPLX3Q8WVH0 158 aa26.77■■□□□ 1.88
NPAS3-211ENST00000551634 MAGEB6P1A0A0J9YX57 407 aa26.77■■□□□ 1.88
NPAS3-211ENST00000551634 GYPCP04921 128 aa26.77■■□□□ 1.88
NPAS3-211ENST00000551634 ATP2C1P98194 919 aaPredicted RBP26.77■■□□□ 1.88
NPAS3-211ENST00000551634 V9GY48 417 aaPredicted RBP26.77■■□□□ 1.88
NPAS3-211ENST00000551634 MAP2K7O14733 419 aa26.76■■□□□ 1.87
NPAS3-211ENST00000551634 TTC38Q5R3I4 469 aa26.76■■□□□ 1.87
NPAS3-211ENST00000551634 IFIT1BQ5T764 474 aaKnown RBP26.76■■□□□ 1.87
NPAS3-211ENST00000551634 MSL3Q8N5Y2 521 aaKnown RBP26.76■■□□□ 1.87
NPAS3-211ENST00000551634 IQUBQ8NA54 791 aa26.76■■□□□ 1.87
NPAS3-211ENST00000551634 RAB21Q9UL25 225 aa26.76■■□□□ 1.87
NPAS3-211ENST00000551634 TRIM14Q14142 442 aa26.76■■□□□ 1.87
NPAS3-211ENST00000551634 SDR42E1Q8WUS8 393 aa26.76■■□□□ 1.87
NPAS3-211ENST00000551634 MYO1AQ9UBC5 1043 aa26.76■■□□□ 1.87
NPAS3-211ENST00000551634 USP5P45974 858 aa26.75■■□□□ 1.87
NPAS3-211ENST00000551634 PARP10Q53GL7 1025 aa26.75■■□□□ 1.87
NPAS3-211ENST00000551634 IQCA1Q86XH1 822 aa26.75■■□□□ 1.87
NPAS3-211ENST00000551634 MSANTD4Q8NCY6 345 aa26.75■■□□□ 1.87
NPAS3-211ENST00000551634 CTAGE9A4FU28 777 aa26.75■■□□□ 1.87
NPAS3-211ENST00000551634 EIF5P55010 431 aaKnown RBP26.75■■□□□ 1.87
NPAS3-211ENST00000551634 ZNF569Q5MCW4 686 aa26.75■■□□□ 1.87
NPAS3-211ENST00000551634 SLAIN2Q9P270 581 aa26.75■■□□□ 1.87
NPAS3-211ENST00000551634 DUOX1Q9NRD9 1551 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 DDAH1O94760 285 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 FGRP09769 529 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 CASP1P29466 404 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 TRAPPC10P48553 1259 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 TROAPQ12815 778 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 E2F4Q16254 413 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 RWDD2AQ9UIY3 292 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 FXR1P51114 621 aaKnown RBP eCLIP26.74■■□□□ 1.87
NPAS3-211ENST00000551634 NPY5RQ15761 445 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 ADGRA1Q86SQ6 560 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 BRIP1Q9BX63 1249 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 PRDM1O75626 825 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 ZNF174Q15697 407 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 KIF4BQ2VIQ3 1234 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 SMYD4Q8IYR2 804 aaPredicted RBP26.74■■□□□ 1.87
NPAS3-211ENST00000551634 RIOK1Q9BRS2 568 aaKnown RBP26.74■■□□□ 1.87
NPAS3-211ENST00000551634 ANKZF1Q9H8Y5 726 aa26.74■■□□□ 1.87
NPAS3-211ENST00000551634 DISP2A7MBM2 1401 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 MYH2Q9UKX2 1941 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 PLEKHA8P1O95397 391 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 PTGDRQ13258 359 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 KRT31Q15323 416 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 TMTC3Q6ZXV5 915 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 ANKRD20A12PQ8NF67 263 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 CTNND2Q9UQB3 1225 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 ZNF804BA4D1E1 1349 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 XDHP47989 1333 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 CHRNDQ07001 517 aa26.73■■□□□ 1.87
NPAS3-211ENST00000551634 WNT7AO00755 349 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 N4BP3O15049 544 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 GTPBP6O43824 516 aaPredicted RBP26.72■■□□□ 1.87
NPAS3-211ENST00000551634 ERLIN1O75477 346 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 TUBBP07437 444 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 HNRNPH2P55795 449 aaKnown RBP26.72■■□□□ 1.87
NPAS3-211ENST00000551634 CYP26C1Q6V0L0 522 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 PSD3Q9NYI0 1048 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 CERKQ8TCT0 537 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 ZCCHC17Q9NP64 241 aaKnown RBP26.72■■□□□ 1.87
NPAS3-211ENST00000551634 ABHD10Q9NUJ1 306 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 GNL3LQ9NVN8 582 aaKnown RBP26.72■■□□□ 1.87
NPAS3-211ENST00000551634 DLEC1Q9Y238 1755 aa26.72■■□□□ 1.87
NPAS3-211ENST00000551634 WHAMMP3Q1A5X7 153 aa26.71■■□□□ 1.87
NPAS3-211ENST00000551634 RMND1Q9NWS8 449 aa26.71■■□□□ 1.87
NPAS3-211ENST00000551634 BEND6Q5SZJ8 279 aaPredicted RBP26.71■■□□□ 1.87
NPAS3-211ENST00000551634 RRAGBQ5VZM2 374 aa26.71■■□□□ 1.87
NPAS3-211ENST00000551634 CDC5LQ99459 802 aaKnown RBP26.71■■□□□ 1.87
NPAS3-211ENST00000551634 NAPGQ99747 312 aaPredicted RBP26.71■■□□□ 1.87
NPAS3-211ENST00000551634 PUF60Q9UHX1 559 aaKnown RBP26.71■■□□□ 1.87
NPAS3-211ENST00000551634 COPB1P53618 953 aaKnown RBP26.7■■□□□ 1.87
NPAS3-211ENST00000551634 PAK1Q13153 545 aa26.7■■□□□ 1.87
NPAS3-211ENST00000551634 PDXDC2PQ6P474 469 aa26.7■■□□□ 1.87
NPAS3-211ENST00000551634 SLC35F6Q8N357 371 aa26.7■■□□□ 1.87
NPAS3-211ENST00000551634 EXOC4Q96A65 974 aa26.7■■□□□ 1.87
NPAS3-211ENST00000551634 ZSWIM4Q9H7M6 989 aa26.7■■□□□ 1.87
NPAS3-211ENST00000551634 ABCF2Q9UG63 623 aa26.7■■□□□ 1.87
NPAS3-211ENST00000551634 SRCAPQ6ZRS2 3230 aa26.7■■□□□ 1.86
NPAS3-211ENST00000551634 A0A0U1RQJ8 604 aa26.7■■□□□ 1.86
NPAS3-211ENST00000551634 MUM1L1Q5H9M0 696 aa26.7■■□□□ 1.86
NPAS3-211ENST00000551634 HDXQ7Z353 690 aa26.7■■□□□ 1.86
NPAS3-211ENST00000551634 ATRIPQ8WXE1 791 aa26.7■■□□□ 1.86
NPAS3-211ENST00000551634 IQSEC3Q9UPP2 1182 aaPredicted RBP26.7■■□□□ 1.86
NPAS3-211ENST00000551634 CNTNAP5Q8WYK1 1306 aa26.69■■□□□ 1.86
NPAS3-211ENST00000551634 hCG_1642624A0A1W2PR95 340 aa26.69■■□□□ 1.86
NPAS3-211ENST00000551634 ST5P78524 1137 aa26.69■■□□□ 1.86
NPAS3-211ENST00000551634 ZNF658Q5TYW1 1059 aaPredicted RBP26.69■■□□□ 1.86
NPAS3-211ENST00000551634 CCT6AP40227 531 aaKnown RBP26.69■■□□□ 1.86
NPAS3-211ENST00000551634 ERVK-24P63145 666 aa26.68■■□□□ 1.86
NPAS3-211ENST00000551634 TCP11X2Q5H9J9 407 aa26.68■■□□□ 1.86
NPAS3-211ENST00000551634 ACRBPQ8NEB7 543 aa26.68■■□□□ 1.86
NPAS3-211ENST00000551634 ARL6IP4Q66PJ3 421 aaKnown RBP26.67■■□□□ 1.86
NPAS3-211ENST00000551634 CTCFLQ8NI51 663 aaPredicted RBP26.67■■□□□ 1.86
NPAS3-211ENST00000551634 GBP3Q9H0R5 595 aa26.67■■□□□ 1.86
NPAS3-211ENST00000551634 LAMB2P55268 1798 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms