RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 GMIPQ9P107 970 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 PLAGL2Q9UPG8 496 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 U3KQE9 123 aa5.56□□□□□ -1.52
SCAF11-215ENST00000551391 RAP1GAPP47736 663 aa5.55□□□□□ -1.52
SCAF11-215ENST00000551391 GIPRP48546 466 aa5.55□□□□□ -1.52
SCAF11-215ENST00000551391 ZP2Q05996 745 aa5.55□□□□□ -1.52
SCAF11-215ENST00000551391 INTS3Q68E01 1043 aaKnown RBP5.55□□□□□ -1.52
SCAF11-215ENST00000551391 TAB3Q8N5C8 712 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-215ENST00000551391 OR6P1Q8NGX9 317 aa5.55□□□□□ -1.52
SCAF11-215ENST00000551391 TOX2Q96NM4 488 aa5.55□□□□□ -1.52
SCAF11-215ENST00000551391 FERD3LQ96RJ6 166 aa5.55□□□□□ -1.52
SCAF11-215ENST00000551391 CNNM2Q9H8M5 875 aa5.55□□□□□ -1.52
SCAF11-215ENST00000551391 PPT2Q9UMR5 302 aa5.55□□□□□ -1.52
SCAF11-215ENST00000551391 CHURC1-FNTBB4DL54 471 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 DNAJA2O60884 412 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 DNAJA1P31689 397 aaKnown RBP5.54□□□□□ -1.52
SCAF11-215ENST00000551391 CCNFP41002 786 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 AFMP43652 599 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 EIF6P56537 245 aaKnown RBP5.54□□□□□ -1.52
SCAF11-215ENST00000551391 MESP2Q0VG99 397 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 SF3A1Q15459 793 aaKnown RBP5.54□□□□□ -1.52
SCAF11-215ENST00000551391 PRAMEF13Q5VWM6 474 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 MCF2L2Q86YR7 1114 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 FAM13CQ8NE31 585 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 ZSCAN18Q8TBC5 510 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-215ENST00000551391 ATG4CQ96DT6 458 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 SHDQ96IW2 340 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 CRBNQ96SW2 442 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 TM9SF2Q99805 663 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.54□□□□□ -1.521e-7■□□□□ 8.4
SCAF11-215ENST00000551391 TNKS2Q9H2K2 1166 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 PRDM10Q9NQV6 1147 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 PRDM7Q9NQW5 492 aa5.54□□□□□ -1.52
SCAF11-215ENST00000551391 GNAT3A8MTJ3 354 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 UPK3BL1B0FP48 263 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 UPK3BL2E5RIL1 263 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 TNFRSF10CO14798 259 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 NME1P15531 152 aaKnown RBP5.53□□□□□ -1.52
SCAF11-215ENST00000551391 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 CYB5D2Q8WUJ1 264 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 CPLX3Q8WVH0 158 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 ARMC5Q96C12 935 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 CCDC74BQ96LY2 380 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 PPP1R16BQ96T49 567 aa5.53□□□□□ -1.52
SCAF11-215ENST00000551391 IGF2BP3O00425 579 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCAF11-215ENST00000551391 RGS13O14921 159 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 SLITRK5O94991 958 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 SSBP05455 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCAF11-215ENST00000551391 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 MPZL3Q6UWV2 235 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 NLRC3Q7RTR2 1065 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 C19orf47Q8N9M1 422 aaKnown RBP5.52□□□□□ -1.53
SCAF11-215ENST00000551391 SREK1Q8WXA9 508 aaKnown RBP5.52□□□□□ -1.53
SCAF11-215ENST00000551391 HEXIM2Q96MH2 286 aaKnown RBP5.52□□□□□ -1.53
SCAF11-215ENST00000551391 TANGO6Q9C0B7 1094 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 ANTXR1Q9H6X2 564 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 KLHL3Q9UH77 587 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 CEP131Q9UPN4 1083 aa5.52□□□□□ -1.53
SCAF11-215ENST00000551391 ZNF503-AS2A6NEH8 195 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 RAG1P15918 1043 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 ATP2B1P20020 1258 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 CASP7P55210 303 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 ARSHQ5FYA8 562 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 FBXW10Q5XX13 1052 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 ZNF746Q6NUN9 644 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-215ENST00000551391 LETMD1Q6P1Q0 360 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 CCDC81Q6ZN84 652 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 FAM214BQ7L5A3 538 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 LSRQ86X29 649 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-215ENST00000551391 ANKLE2Q86XL3 938 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 DNAJB8Q8NHS0 232 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 PPP1R13LQ8WUF5 828 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 LIN37Q96GY3 246 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-215ENST00000551391 COX4I2Q96KJ9 171 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCAF11-215ENST00000551391 CTNND2Q9UQB3 1225 aa5.51□□□□□ -1.53
SCAF11-215ENST00000551391 EOMESO95936 686 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 GUCY2CP25092 1073 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 CLCN7P51798 805 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 TMEM67Q5HYA8 995 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 SYDE1Q6ZW31 735 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-215ENST00000551391 SPACA3Q8IXA5 215 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 PHACTR4Q8IZ21 702 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 KIRREL1Q96J84 757 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 MIPEPQ99797 713 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 DPH2Q9BQC3 489 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-215ENST00000551391 LMCD1Q9NZU5 365 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 PRKAG3Q9UGI9 489 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 SLC12A7Q9Y666 1083 aa5.5□□□□□ -1.53
SCAF11-215ENST00000551391 TSPAN15O95858 294 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 GLI1P08151 1106 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 CYP7A1P22680 504 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 ETV3P41162 512 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 RBL2Q08999 1139 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 TNNI3KQ59H18 835 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 C22orf34Q6ZV56 151 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 RIN3Q8TB24 985 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 BAHD1Q8TBE0 780 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-215ENST00000551391 ANAPC16Q96DE5 110 aa5.49□□□□□ -1.53
SCAF11-215ENST00000551391 DRC1Q96MC2 740 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms