RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 C11orf57Q6ZUT1 292 aaPredicted RBP6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 ANKRD23Q86SG2 305 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 TMEM139Q8IV31 216 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 PGBD3Q8N328 593 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 VWA5B2Q8N398 1253 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 CNNM3Q8NE01 707 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 HELQQ8TDG4 1101 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 LEO1Q8WVC0 666 aaPredicted RBP6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 ZSCAN31Q96LW9 406 aaPredicted RBP6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 CLIC6Q96NY7 704 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 TUBB2BQ9BVA1 445 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 ZCCHC2Q9C0B9 1178 aaKnown RBP6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 SCAND2PQ9GZW5 306 aaPredicted RBP6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 DNAJC25Q9H1X3 360 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 TNMDQ9H2S6 317 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 ANKZF1Q9H8Y5 726 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 VEZTQ9HBM0 779 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 HYPKQ9NX55 129 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 DACT1Q9NYF0 836 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 GGA2Q9UJY4 613 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 GNEQ9Y223 722 aaKnown RBP6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 ABCA9Q8IUA7 1624 aa6.07□□□□□ -1.44
LSM3P2-201ENST00000551246 ABCA8O94911 1581 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 VWA3AA6NCI4 1184 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 H0YHG0 523 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 TGFBR3LH3BV60 316 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 NPHP1O15259 732 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 EFSO43281 561 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SYF2O95926 243 aaKnown RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 FAM157BP0CG42 384 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 MYBL2P10244 700 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SERPINB4P48594 390 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SLC8A3P57103 927 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 KRT85P78386 507 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SARNPP82979 210 aaKnown RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 MTA1Q13330 715 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 GAS6Q14393 721 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 PLCB4Q15147 1175 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 STX1AQ16623 288 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 EMC10Q5UCC4 262 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 RCSD1Q6JBY9 416 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 LRRC69Q6ZNQ3 347 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 BRAPQ7Z569 592 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 YTHDF3Q7Z739 585 aaKnown RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 ANKRD18AQ8IVF6 992 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 ENGASEQ8NFI3 743 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 CTCFLQ8NI51 663 aaPredicted RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 GTF3C2Q8WUA4 911 aaPredicted RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 GOLGA1Q92805 767 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 GTPBP3Q969Y2 492 aaKnown RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 CABS1Q96KC9 395 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 BAG1Q99933 345 aaPredicted RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SH3GL3Q99963 347 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 LSG1Q9H089 658 aaKnown RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 EPC1Q9H2F5 836 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SH2B1Q9NRF2 756 aaPredicted RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 VPS18Q9P253 973 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 CCDC9Q9Y3X0 531 aaKnown RBP6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SNX14Q9Y5W7 946 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 FAM169AQ9Y6X4 670 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SAMD9LQ8IVG5 1584 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 SETBP1Q9Y6X0 1596 aa6.06□□□□□ -1.44
LSM3P2-201ENST00000551246 TCHHQ07283 1943 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 GOLGA6L9A6NEM1 432 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 SRRM3A6NNA2 597 aaPredicted RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 GPR25O00155 361 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 BNIP3LO60238 219 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 N4BP1O75113 896 aaKnown RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 EIF3JO75822 258 aaKnown RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 TSPY4P0CV99 314 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 TSPY10P0CW01 314 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 PAX7P23759 505 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 GRNP28799 593 aaKnown RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 ARID4AP29374 1257 aaPredicted RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 AMPHP49418 695 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 CCNHP51946 323 aaPredicted RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 MNAT1P51948 309 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 AK2P54819 239 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 PPP2R3AQ06190 1150 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 TBX2Q13207 712 aaPredicted RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 PDIA5Q14554 519 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 NCAPHQ15003 741 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 TBC1D25Q3MII6 688 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 FBXW10Q5XX13 1052 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 WDR93Q6P2C0 686 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 GBP6Q6ZN66 633 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 SV2AQ7L0J3 742 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 SRGAP1Q7Z6B7 1085 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 SPATS2Q86XZ4 545 aaKnown RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 ETFBKMTQ8IXQ9 262 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 CKAP2LQ8IYA6 745 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 TCP11Q8WWU5 503 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 ERCC4Q92889 916 aaPredicted RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 CCDC34Q96HJ3 373 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 SH3GL2Q99962 352 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 SMC3Q9UQE7 1217 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 TARBP1Q13395 1621 aaKnown RBP6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 CEMIPQ8WUJ3 1361 aa6.05□□□□□ -1.44
LSM3P2-201ENST00000551246 LMTK2Q8IWU2 1503 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms