RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 ORC4O43929 436 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 TSPY3P0CV98 308 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 TSPY8P0CW00 308 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 PCP11498 1178 aaKnown RBP18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 HOXD10P28358 340 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 CTGFP29279 349 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 CTDSPL2Q05D32 466 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 PPP4R3BQ5MIZ7 849 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 LBX2Q6XYB7 198 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 NBPF11Q86T75 865 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 ARMC5Q96C12 935 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 TRIM47Q96LD4 638 aa18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
PRPF40B-211ENST00000551063 MYH8P13535 1937 aa18.29■□□□□ 0.52
PRPF40B-211ENST00000551063 WDR46O15213 610 aaKnown RBP18.29■□□□□ 0.52
PRPF40B-211ENST00000551063 FMNL1O95466 1100 aaPredicted RBP18.29■□□□□ 0.52
PRPF40B-211ENST00000551063 CHMLP26374 656 aa18.29■□□□□ 0.52
PRPF40B-211ENST00000551063 GOPCQ9HD26 462 aa18.29■□□□□ 0.52
PRPF40B-211ENST00000551063 SRRDQ9UH36 339 aa18.29■□□□□ 0.52
PRPF40B-211ENST00000551063 NT5C2P49902 561 aa18.28■□□□□ 0.52
PRPF40B-211ENST00000551063 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
PRPF40B-211ENST00000551063 CEP95Q96GE4 821 aa18.28■□□□□ 0.52
PRPF40B-211ENST00000551063 MTMR4Q9NYA4 1195 aa18.28■□□□□ 0.52
PRPF40B-211ENST00000551063 MYPNQ86TC9 1320 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 TSPY2A6NKD2 308 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 SPDYE16A6NNV3 312 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 TNPO2O14787 897 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 TTLL1O95922 423 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 TFAP4Q01664 338 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 BMP2KLQ5H9B9 411 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 KIAA1755Q5JYT7 1200 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 GPRC5AQ8NFJ5 357 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 MKL1Q969V6 931 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 TMEM106CQ9BVX2 250 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 TANGO6Q9C0B7 1094 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 IL25Q9H293 177 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 TXNRD2Q9NNW7 524 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 RBPJLQ9UBG7 517 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 RABGAP1Q9Y3P9 1069 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 PTCH2Q9Y6C5 1203 aa18.27■□□□□ 0.52
PRPF40B-211ENST00000551063 TNRC18O15417 2968 aaPredicted RBP18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 POTEFA5A3E0 1075 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 HAND2P61296 217 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 ERVK-9P63128 1117 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 ERVK-24P63145 666 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 SLC9C1Q4G0N8 1177 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 FAM47AQ5JRC9 791 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 HOXC10Q9NYD6 342 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 CTNNA3Q9UI47 895 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 TACC3Q9Y6A5 838 aa18.26■□□□□ 0.51
PRPF40B-211ENST00000551063 ZNF213O14771 459 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 RANBP6O60518 1105 aaKnown RBP18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 COG2Q14746 738 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 AKNAD1Q5T1N1 836 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 COA7Q96BR5 231 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 PAGR1Q9BTK6 254 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 NBPF3Q9H094 633 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 HTTP42858 3142 aa18.25■□□□□ 0.51
PRPF40B-211ENST00000551063 SGSM2O43147 1006 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 FLOT1O75955 427 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 NDUFB10O96000 172 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 DSG3P32926 999 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 PRKCZQ05513 592 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 IMMTQ16891 758 aaKnown RBP18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 POTEEQ6S8J3 1075 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 MFSD6Q6ZSS7 791 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 MB21D1Q8N884 522 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 GMCL1P1Q8NEA9 526 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 ZNF333Q96JL9 665 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 INCENPQ9NQS7 918 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
PRPF40B-211ENST00000551063 F5H6K3 240 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 CNMDO75829 334 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 MAPK4P31152 587 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 NOVP48745 357 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 CCNA1P78396 465 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 KLRC3Q07444 240 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 RAET1EQ8TD07 263 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 TCP11L1Q9NUJ3 509 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 ZSWIM8A7E2V4 1837 aa18.23■□□□□ 0.51
PRPF40B-211ENST00000551063 FLT3LGP49771 235 aa18.22■□□□□ 0.51
PRPF40B-211ENST00000551063 IRF5Q13568 498 aa18.22■□□□□ 0.51
PRPF40B-211ENST00000551063 RRP12Q5JTH9 1297 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-211ENST00000551063 FAM83BQ5T0W9 1011 aa18.22■□□□□ 0.51
PRPF40B-211ENST00000551063 SKAP1Q86WV1 359 aa18.22■□□□□ 0.51
PRPF40B-211ENST00000551063 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
PRPF40B-211ENST00000551063 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
PRPF40B-211ENST00000551063 STX8Q9UNK0 236 aa18.22■□□□□ 0.51
PRPF40B-211ENST00000551063 RAD21O60216 631 aa18.21■□□□□ 0.51
PRPF40B-211ENST00000551063 PEX10O60683 326 aa18.21■□□□□ 0.51
PRPF40B-211ENST00000551063 EN2P19622 333 aaPredicted RBP18.21■□□□□ 0.51
PRPF40B-211ENST00000551063 Q3C1V9 767 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms