RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SUSD5O60279 629 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 TP53P04637 393 aaPredicted RBP7.26□□□□□ -1.25
LIMA1-205ENST00000550592 CHMP4BP1P59074 171 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 RNF4P78317 190 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 RASSF7Q02833 373 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 MTERF2Q49AM1 385 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 TDRD10Q5VZ19 366 aaKnown RBP7.26□□□□□ -1.25
LIMA1-205ENST00000550592 TOP6BLQ8N6T0 577 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 JMYQ8N9B5 988 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 HAUS7Q99871 368 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 ASPNQ9BXN1 380 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 STOML1Q9UBI4 398 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 ZMYM5Q9UJ78 669 aa7.26□□□□□ -1.25
LIMA1-205ENST00000550592 HMX2A2RU54 273 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 ANKRD34BA5PLL1 514 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 LEFTY1O75610 366 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 OGFOD3Q6PK18 319 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 SPATC1Q76KD6 591 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 CCDC144CPQ8IYA2 1237 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 TP53INP1Q96A56 240 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 COX4I2Q96KJ9 171 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 ZNF512BQ96KM6 892 aaPredicted RBP7.25□□□□□ -1.25
LIMA1-205ENST00000550592 C7orf69Q9H7B7 122 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 CNTNAP4Q9C0A0 1308 aa7.25□□□□□ -1.25
LIMA1-205ENST00000550592 CBFA2T2O43439 604 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 EPHX1P07099 455 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 FAM87AP0C7U9 286 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 NAT2P11245 290 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 CYP7A1P22680 504 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 ADMP35318 185 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 AUHQ13825 339 aaKnown RBP7.24□□□□□ -1.25
LIMA1-205ENST00000550592 SLC10A6Q3KNW5 377 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 HEATR6Q6AI08 1181 aaKnown RBP7.24□□□□□ -1.25
LIMA1-205ENST00000550592 PRR23CQ6ZRP0 262 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 ZAR1Q86SH2 424 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 C7orf61Q8IZ16 206 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 APBA2Q99767 749 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 MKRN2Q9H000 416 aaKnown RBP7.24□□□□□ -1.25
LIMA1-205ENST00000550592 KLHL25Q9H0H3 589 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 FAM86C1Q9NVL1 165 aa7.24□□□□□ -1.25
LIMA1-205ENST00000550592 TPX2Q9ULW0 747 aaKnown RBP7.24□□□□□ -1.25
LIMA1-205ENST00000550592 ENPP3O14638 875 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 SHOXO15266 292 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 DIAPH1O60610 1272 aaKnown RBP7.23□□□□□ -1.25
LIMA1-205ENST00000550592 ITGB2P05107 769 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 SSRP1Q08945 709 aaKnown RBP7.23□□□□□ -1.25
LIMA1-205ENST00000550592 NBPF9Q3BBW0 867 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 EGFLAMQ63HQ2 1017 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 DCAF15Q66K64 600 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 ZNF513Q8N8E2 541 aaPredicted RBP7.23□□□□□ -1.25
LIMA1-205ENST00000550592 SH3TC2Q8TF17 1288 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 THAP3Q8WTV1 239 aaPredicted RBP7.23□□□□□ -1.25
LIMA1-205ENST00000550592 SGSM3Q96HU1 749 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 TBC1D32Q96NH3 1257 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 PFDN2Q9UHV9 154 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 ZNF451Q9Y4E5 1061 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 KDM2BQ8NHM5 1336 aa7.23□□□□□ -1.25
LIMA1-205ENST00000550592 RB1CC1Q8TDY2 1594 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 IQCA1LA6NCM1 817 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 IGF2BP3O00425 579 aaKnown RBP eCLIP7.22□□□□□ -1.25
LIMA1-205ENST00000550592 CD247P20963 164 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 HSD3B2P26439 372 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 TCEAL1Q15170 157 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 C2orf27AQ580R0 203 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 RNF43Q68DV7 783 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 C22orf34Q6ZV56 151 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 HEXIM2Q96MH2 286 aaKnown RBP7.22□□□□□ -1.25
LIMA1-205ENST00000550592 SPATA9Q9BWV2 254 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 KANSL2Q9H9L4 492 aa7.22□□□□□ -1.25
LIMA1-205ENST00000550592 PRDM5Q9NQX1 630 aaPredicted RBP7.22□□□□□ -1.25
LIMA1-205ENST00000550592 CCDC180Q9P1Z9 1646 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 A0A087WZG4 1122 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 KIR3DL1P43629 444 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 CYP27A1Q02318 531 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 LONRF2Q1L5Z9 754 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 PLA2G4EQ3MJ16 856 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 CYP27C1Q4G0S4 372 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 SFRP5Q5T4F7 317 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 SHISA5Q8N114 240 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 LRRC47Q8N1G4 583 aaKnown RBP7.21□□□□□ -1.26
LIMA1-205ENST00000550592 GBP3Q9H0R5 595 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 GP6Q9HCN6 339 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 TPSG1Q9NRR2 321 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 PRR13Q9NZ81 148 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 WHRNQ9P202 907 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 GTF2IRD1Q9UHL9 959 aa7.21□□□□□ -1.26
LIMA1-205ENST00000550592 AGRPO00253 132 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 ADCY3O60266 1144 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 LRRN2O75325 713 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 GDF11O95390 407 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 SQSTM1Q13501 440 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 SV2CQ496J9 727 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 RCC1LQ96I51 464 aaKnown RBP7.2□□□□□ -1.26
LIMA1-205ENST00000550592 Q96M66 194 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 FGD4Q96M96 766 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 TMEM260Q9NX78 707 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 APEX2Q9UBZ4 518 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 PCDHB12Q9Y5F1 795 aa7.2□□□□□ -1.26
LIMA1-205ENST00000550592 FAM170BA6NMN3 283 aa7.19□□□□□ -1.26
LIMA1-205ENST00000550592 RBAK-RBAKDNI3L0D1 243 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms