RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 PICK1Q9NRD5 415 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 ZBTB21Q9ULJ3 1066 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 KIF3AQ9Y496 699 aa12.39□□□□□ -0.43
CHPT1-206ENST00000550385 POLR2AP24928 1970 aaKnown RBP12.38□□□□□ -0.43
CHPT1-206ENST00000550385 USP17L5A8MUK1 530 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 USP2O75604 605 aaPredicted RBP12.38□□□□□ -0.43
CHPT1-206ENST00000550385 SLURP2P0DP57 97 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 EEF2P13639 858 aaKnown RBP12.38□□□□□ -0.43
CHPT1-206ENST00000550385 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
CHPT1-206ENST00000550385 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 HMGN5P82970 282 aaKnown RBP12.38□□□□□ -0.43
CHPT1-206ENST00000550385 ATP2B2Q01814 1243 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 SCRN1Q12765 414 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 TROAPQ12815 778 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 RTN1Q16799 776 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 MICU3Q86XE3 530 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 SCYL3Q8IZE3 742 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 NECAB1Q8N987 351 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
CHPT1-206ENST00000550385 WRNIP1Q96S55 665 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 LZTS2Q9BRK4 669 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 GLIS2Q9BZE0 524 aaPredicted RBP12.38□□□□□ -0.43
CHPT1-206ENST00000550385 AS3MTQ9HBK9 375 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 GPBP1L1Q9HC44 474 aaPredicted RBP12.38□□□□□ -0.43
CHPT1-206ENST00000550385 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 SMC3Q9UQE7 1217 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 MYH8P13535 1937 aa12.38□□□□□ -0.43
CHPT1-206ENST00000550385 SIPA1L1O43166 1804 aa12.37□□□□□ -0.43
CHPT1-206ENST00000550385 LARGE1O95461 756 aa12.37□□□□□ -0.43
CHPT1-206ENST00000550385 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
CHPT1-206ENST00000550385 FKBP1BP68106 108 aa12.37□□□□□ -0.43
CHPT1-206ENST00000550385 TTLL12Q14166 644 aaPredicted RBP12.37□□□□□ -0.43
CHPT1-206ENST00000550385 RRP1BQ14684 758 aaKnown RBP12.37□□□□□ -0.43
CHPT1-206ENST00000550385 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
CHPT1-206ENST00000550385 NOL9Q5SY16 702 aaKnown RBP12.37□□□□□ -0.43
CHPT1-206ENST00000550385 MAP1SQ66K74 1059 aaPredicted RBP12.37□□□□□ -0.43
CHPT1-206ENST00000550385 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
CHPT1-206ENST00000550385 CSADQ9Y600 493 aa12.37□□□□□ -0.43
CHPT1-206ENST00000550385 NID2Q14112 1375 aa12.37□□□□□ -0.43
CHPT1-206ENST00000550385 PARP1P09874 1014 aaKnown RBP12.36□□□□□ -0.43
CHPT1-206ENST00000550385 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 INPP5BP32019 993 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 NUBP1P53384 320 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 GRM4Q14833 912 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 ANKRD13AQ8IZ07 590 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 SPRYD3Q8NCJ5 442 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.43
CHPT1-206ENST00000550385 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 TMX2Q9Y320 296 aa12.36□□□□□ -0.43
CHPT1-206ENST00000550385 F5H6K3 240 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 POTEJP0CG39 1038 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 IFNAR1P17181 557 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 PDCP20941 246 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
CHPT1-206ENST00000550385 USP14P54578 494 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 JAG1P78504 1218 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 AKAP17AQ02040 695 aaKnown RBP12.35□□□□□ -0.43
CHPT1-206ENST00000550385 KLRC3Q07444 240 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
CHPT1-206ENST00000550385 PRKG1Q13976 671 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 ASPRV1Q53RT3 343 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 GPATCH4Q5T3I0 446 aaKnown RBP12.35□□□□□ -0.43
CHPT1-206ENST00000550385 SIAH1Q8IUQ4 282 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 SMARCC2Q8TAQ2 1214 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 MYL10Q9BUA6 226 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
CHPT1-206ENST00000550385 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
CHPT1-206ENST00000550385 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
CHPT1-206ENST00000550385 C19orf81C9J6K1 198 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 USP17L10C9JJH3 530 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 SNHG28P0DPA3 235 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 PDHBP11177 359 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 PTPRAP18433 802 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 RXRAP19793 462 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 CDC27P30260 824 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 SLC1A4P43007 532 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 SLFN13Q68D06 897 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 CCDC144CPQ8IYA2 1237 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 LRRC47Q8N1G4 583 aaKnown RBP12.34□□□□□ -0.43
CHPT1-206ENST00000550385 C2orf69Q8N8R5 385 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 WASF1Q92558 559 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 ZKSCAN4Q969J2 545 aaPredicted RBP12.34□□□□□ -0.43
CHPT1-206ENST00000550385 GMCL1Q96IK5 515 aa12.34□□□□□ -0.43
CHPT1-206ENST00000550385 TSPYL2Q9H2G4 693 aaPredicted RBP12.34□□□□□ -0.43
CHPT1-206ENST00000550385 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
CHPT1-206ENST00000550385 FAM217BQ9NTX9 383 aaPredicted RBP12.34□□□□□ -0.43
CHPT1-206ENST00000550385 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
CHPT1-206ENST00000550385 GREB1LQ9C091 1923 aaPredicted RBP12.33□□□□□ -0.44
CHPT1-206ENST00000550385 KLRF2D3W0D1 207 aa12.33□□□□□ -0.44
CHPT1-206ENST00000550385 GJB2P29033 226 aa12.33□□□□□ -0.44
CHPT1-206ENST00000550385 PPATQ06203 517 aa12.33□□□□□ -0.44
CHPT1-206ENST00000550385 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
CHPT1-206ENST00000550385 NTRK3Q16288 839 aa12.33□□□□□ -0.44
CHPT1-206ENST00000550385 SHROOM1Q2M3G4 852 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms