RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 APEX2Q9UBZ4 518 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 FBXL21Q9UKT6 434 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 G3BP2Q9UN86 482 aaKnown RBP7.96□□□□□ -1.14
HCFC2-204ENST00000550335 ACTL7BQ9Y614 415 aa7.96□□□□□ -1.14
HCFC2-204ENST00000550335 NOP56O00567 594 aaKnown RBP7.95□□□□□ -1.14
HCFC2-204ENST00000550335 PPM1BO75688 479 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 ALX3O95076 343 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 SLURP2P0DP57 97 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 ZNF143P52747 638 aaPredicted RBP7.95□□□□□ -1.14
HCFC2-204ENST00000550335 ILDR2Q71H61 639 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 CDH24Q86UP0 819 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 RPUSD2Q8IZ73 545 aaKnown RBP7.95□□□□□ -1.14
HCFC2-204ENST00000550335 CHAC2Q8WUX2 184 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 NINJ1Q92982 152 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 MRPL18Q9H0U6 180 aaKnown RBP7.95□□□□□ -1.14
HCFC2-204ENST00000550335 ARHGEF4Q9NR80 690 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 SUSD2Q9UGT4 822 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 PCOLCE2Q9UKZ9 415 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 MRPS23Q9Y3D9 190 aaKnown RBP7.95□□□□□ -1.14
HCFC2-204ENST00000550335 ZNF451Q9Y4E5 1061 aa7.95□□□□□ -1.14
HCFC2-204ENST00000550335 CCDC163A0A0D9SF12 145 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 NOL9Q5SY16 702 aaKnown RBP7.94□□□□□ -1.14
HCFC2-204ENST00000550335 IGF2-ASQ6U949 168 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 ARMCX6Q7L4S7 300 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 SCUBE1Q8IWY4 988 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 SMARCC1Q92922 1105 aaPredicted RBP7.94□□□□□ -1.14
HCFC2-204ENST00000550335 TRIM11Q96F44 468 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 MIPEPQ99797 713 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 ENAMQ9NRM1 1142 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 AKT3Q9Y243 479 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 DAGLAQ9Y4D2 1042 aa7.94□□□□□ -1.14
HCFC2-204ENST00000550335 GAS2O43903 313 aaKnown RBP7.93□□□□□ -1.14
HCFC2-204ENST00000550335 GMPRP36959 345 aa7.93□□□□□ -1.14
HCFC2-204ENST00000550335 GRIA2P42262 883 aa7.93□□□□□ -1.14
HCFC2-204ENST00000550335 PPP2R5DQ14738 602 aa7.93□□□□□ -1.14
HCFC2-204ENST00000550335 NSMFQ6X4W1 530 aa7.93□□□□□ -1.14
HCFC2-204ENST00000550335 SVOPQ8N4V2 548 aa7.93□□□□□ -1.14
HCFC2-204ENST00000550335 C2CD4AQ8NCU7 369 aaPredicted RBP7.93□□□□□ -1.14
HCFC2-204ENST00000550335 CLUHP3Q96NS8 147 aa7.93□□□□□ -1.14
HCFC2-204ENST00000550335 SUGCTQ9HAC7 445 aa7.93□□□□□ -1.14
HCFC2-204ENST00000550335 NCOA5Q9HCD5 579 aaKnown RBP7.93□□□□□ -1.14
HCFC2-204ENST00000550335 LRRC4BQ9NT99 713 aa7.93□□□□□ -1.14
HCFC2-204ENST00000550335 PLD2O14939 933 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 TBX1O43435 398 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 CBFA2T2O43439 604 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 LRIG2O94898 1065 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 S100BP04271 92 aaPredicted RBP7.92□□□□□ -1.14
HCFC2-204ENST00000550335 CD247P20963 164 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 PLEKHG6Q3KR16 790 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 TM4SF20Q53R12 229 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 SHISA2Q6UWI4 295 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 KRT26Q7Z3Y9 468 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 ZNF227Q86WZ6 799 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 JAMLQ86YT9 394 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 C7orf61Q8IZ16 206 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 MFSD2AQ8NA29 543 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 BVESQ8NE79 360 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 RIN3Q8TB24 985 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 BRF1Q92994 677 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 KLHL25Q9H0H3 589 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 USP21Q9UK80 565 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 CEP131Q9UPN4 1083 aa7.92□□□□□ -1.14
HCFC2-204ENST00000550335 PDE8AO60658 829 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 KCNH1O95259 989 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 PABPC1P11940 636 aaKnown RBP7.91□□□□□ -1.14
HCFC2-204ENST00000550335 GLB1P16278 677 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 RXRBP28702 533 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 KCNJ6P48051 423 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 SNRPNP63162 240 aaKnown RBP7.91□□□□□ -1.14
HCFC2-204ENST00000550335 NFKB2Q00653 900 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 AUHQ13825 339 aaKnown RBP7.91□□□□□ -1.14
HCFC2-204ENST00000550335 FAM50AQ14320 339 aaKnown RBP7.91□□□□□ -1.14
HCFC2-204ENST00000550335 GRIK4Q16099 956 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 PRRT3Q5FWE3 981 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 NBPF12Q5TAG4 269 aaPredicted RBP7.91□□□□□ -1.14
HCFC2-204ENST00000550335 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.91□□□□□ -1.14
HCFC2-204ENST00000550335 FERMT3Q86UX7 667 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 KISS1RQ969F8 398 aaPredicted RBP7.91□□□□□ -1.14
HCFC2-204ENST00000550335 KREMEN1Q96MU8 473 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 IER2Q9BTL4 223 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 FAM126AQ9BYI3 521 aaPredicted RBP7.91□□□□□ -1.14
HCFC2-204ENST00000550335 HOMER2Q9NSB8 354 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 NDOR1Q9UHB4 597 aa7.91□□□□□ -1.14
HCFC2-204ENST00000550335 TIAF1O95411 115 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 NFICP08651 508 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 ITGA4P13612 1032 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 HOXB4P17483 251 aaPredicted RBP7.9□□□□□ -1.14
HCFC2-204ENST00000550335 RNF4P78317 190 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 ANKRD34AQ69YU3 496 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 LETMD1Q6P1Q0 360 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 PPP1R13LQ8WUF5 828 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 BTN2A2Q8WVV5 523 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 CEP89Q96ST8 783 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 NOL6Q9H6R4 1146 aaKnown RBP7.9□□□□□ -1.14
HCFC2-204ENST00000550335 CAAP1Q9H8G2 361 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 GP6Q9HCN6 339 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 WHRNQ9P202 907 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 ATP8A1Q9Y2Q0 1164 aa7.9□□□□□ -1.14
HCFC2-204ENST00000550335 BLACEA4D250 179 aa7.89□□□□□ -1.15
HCFC2-204ENST00000550335 F8W735 103 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms