RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 IGKV6D-41A0A0C4DH26 115 aa30.74■■■□□ 2.51
CPSF6-205ENST00000550075 ZNF213O14771 459 aa30.74■■■□□ 2.51
CPSF6-205ENST00000550075 FCGRTP55899 365 aa30.74■■■□□ 2.51
CPSF6-205ENST00000550075 HAND2P61296 217 aa30.74■■■□□ 2.51
CPSF6-205ENST00000550075 CATSPERGQ6ZRH7 1159 aa30.74■■■□□ 2.51
CPSF6-205ENST00000550075 P2RX7Q99572 595 aaKnown RBP30.74■■■□□ 2.51
CPSF6-205ENST00000550075 TANGO6Q9C0B7 1094 aa30.74■■■□□ 2.51
CPSF6-205ENST00000550075 WDR46O15213 610 aaKnown RBP30.73■■■□□ 2.51
CPSF6-205ENST00000550075 RANBP6O60518 1105 aaKnown RBP30.73■■■□□ 2.51
CPSF6-205ENST00000550075 FMNL1O95466 1100 aaPredicted RBP30.73■■■□□ 2.51
CPSF6-205ENST00000550075 PSMC4P43686 418 aa30.73■■■□□ 2.51
CPSF6-205ENST00000550075 FAM47AQ5JRC9 791 aa30.73■■■□□ 2.51
CPSF6-205ENST00000550075 CEP95Q96GE4 821 aa30.73■■■□□ 2.51
CPSF6-205ENST00000550075 SYNPO2Q9UMS6 1093 aa30.73■■■□□ 2.51
CPSF6-205ENST00000550075 MGAMO43451 1857 aa30.73■■■□□ 2.51
CPSF6-205ENST00000550075 ZSWIM8A7E2V4 1837 aa30.73■■■□□ 2.51
CPSF6-205ENST00000550075 TTLL1O95922 423 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 FGRP09769 529 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 HOXD10P28358 340 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 NT5C2P49902 561 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 PRMT2P55345 433 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 IMMTQ16891 758 aaKnown RBP30.72■■■□□ 2.51
CPSF6-205ENST00000550075 AKNAD1Q5T1N1 836 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 MFSD6Q6ZSS7 791 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 STAG1Q8WVM7 1258 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 ARHGAP39Q9C0H5 1083 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 MTMR4Q9NYA4 1195 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 MORF4L1Q9UBU8 362 aa30.72■■■□□ 2.51
CPSF6-205ENST00000550075 SGSM2O43147 1006 aa30.71■■■□□ 2.51
CPSF6-205ENST00000550075 RAD21O60216 631 aa30.71■■■□□ 2.51
CPSF6-205ENST00000550075 SKAP1Q86WV1 359 aa30.71■■■□□ 2.51
CPSF6-205ENST00000550075 RRP12Q5JTH9 1297 aaKnown RBP30.7■■■□□ 2.51
CPSF6-205ENST00000550075 SPICE1Q8N0Z3 855 aa30.7■■■□□ 2.51
CPSF6-205ENST00000550075 TRIM47Q96LD4 638 aa30.7■■■□□ 2.51
CPSF6-205ENST00000550075 IL25Q9H293 177 aa30.7■■■□□ 2.51
CPSF6-205ENST00000550075 CLIP2Q9UDT6 1046 aa30.7■■■□□ 2.51
CPSF6-205ENST00000550075 PTPN22Q9Y2R2 807 aa30.7■■■□□ 2.51
CPSF6-205ENST00000550075 ECM2O94769 699 aaPredicted RBP30.68■■■□□ 2.5
CPSF6-205ENST00000550075 CAP1Q01518 475 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 CASC1Q6TDU7 716 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 LBX2Q6XYB7 198 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 TBC1D10CQ8IV04 446 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 GPRC5AQ8NFJ5 357 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 PAGR1Q9BTK6 254 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 HOXC10Q9NYD6 342 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 HPS5Q9UPZ3 1129 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 RABGAP1Q9Y3P9 1069 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 MYPNQ86TC9 1320 aa30.68■■■□□ 2.5
CPSF6-205ENST00000550075 TNPO2O14787 897 aaKnown RBP30.67■■■□□ 2.5
CPSF6-205ENST00000550075 COG2Q14746 738 aa30.67■■■□□ 2.5
CPSF6-205ENST00000550075 MKL1Q969V6 931 aa30.67■■■□□ 2.5
CPSF6-205ENST00000550075 NBPF3Q9H094 633 aa30.67■■■□□ 2.5
CPSF6-205ENST00000550075 INCENPQ9NQS7 918 aa30.67■■■□□ 2.5
CPSF6-205ENST00000550075 SPDYE16A6NNV3 312 aaPredicted RBP30.66■■■□□ 2.5
CPSF6-205ENST00000550075 FLOT1O75955 427 aa30.66■■■□□ 2.5
CPSF6-205ENST00000550075 KIAA1755Q5JYT7 1200 aa30.66■■■□□ 2.5
CPSF6-205ENST00000550075 IFFO2Q5TF58 517 aa30.66■■■□□ 2.5
CPSF6-205ENST00000550075 KIAA1211Q6ZU35 1233 aa30.66■■■□□ 2.5
CPSF6-205ENST00000550075 ESR2Q92731 530 aa30.66■■■□□ 2.5
CPSF6-205ENST00000550075 SRRDQ9UH36 339 aa30.66■■■□□ 2.5
CPSF6-205ENST00000550075 STX8Q9UNK0 236 aa30.66■■■□□ 2.5
CPSF6-205ENST00000550075 TACC3Q9Y6A5 838 aa30.66■■■□□ 2.5
CPSF6-205ENST00000550075 U3KPZ7 1027 aaPredicted RBP30.66■■■□□ 2.5
CPSF6-205ENST00000550075 F5H6K3 240 aa30.65■■■□□ 2.5
CPSF6-205ENST00000550075 CTGFP29279 349 aa30.65■■■□□ 2.5
CPSF6-205ENST00000550075 ERVK-9P63128 1117 aa30.65■■■□□ 2.5
CPSF6-205ENST00000550075 ERVK-24P63145 666 aa30.65■■■□□ 2.5
CPSF6-205ENST00000550075 KLRC3Q07444 240 aa30.65■■■□□ 2.5
CPSF6-205ENST00000550075 CCAR1Q8IX12 1150 aaKnown RBP30.65■■■□□ 2.5
CPSF6-205ENST00000550075 COA7Q96BR5 231 aa30.65■■■□□ 2.5
CPSF6-205ENST00000550075 RBPJLQ9UBG7 517 aa30.65■■■□□ 2.5
CPSF6-205ENST00000550075 NDUFB10O96000 172 aa30.64■■■□□ 2.5
CPSF6-205ENST00000550075 CCNA1P78396 465 aa30.64■■■□□ 2.5
CPSF6-205ENST00000550075 LRRC47Q8N1G4 583 aaKnown RBP30.64■■■□□ 2.5
CPSF6-205ENST00000550075 MB21D1Q8N884 522 aa30.64■■■□□ 2.5
CPSF6-205ENST00000550075 GMCL1P1Q8NEA9 526 aa30.64■■■□□ 2.5
CPSF6-205ENST00000550075 A0A0G2JMZ2 1700 aa30.64■■■□□ 2.5
CPSF6-205ENST00000550075 PARP14Q460N5 1801 aa30.63■■■□□ 2.49
CPSF6-205ENST00000550075 FAM83BQ5T0W9 1011 aa30.63■■■□□ 2.49
CPSF6-205ENST00000550075 ESYT1Q9BSJ8 1104 aa30.63■■■□□ 2.49
CPSF6-205ENST00000550075 CNNM2Q9H8M5 875 aa30.63■■■□□ 2.49
CPSF6-205ENST00000550075 TXNRD2Q9NNW7 524 aa30.63■■■□□ 2.49
CPSF6-205ENST00000550075 TCP11L1Q9NUJ3 509 aa30.63■■■□□ 2.49
CPSF6-205ENST00000550075 PTCH2Q9Y6C5 1203 aa30.63■■■□□ 2.49
CPSF6-205ENST00000550075 NEDD4P46934 1319 aa30.63■■■□□ 2.49
CPSF6-205ENST00000550075 CDC45O75419 566 aa30.62■■■□□ 2.49
CPSF6-205ENST00000550075 MAPK4P31152 587 aa30.62■■■□□ 2.49
CPSF6-205ENST00000550075 DSG3P32926 999 aa30.62■■■□□ 2.49
CPSF6-205ENST00000550075 RAET1EQ8TD07 263 aa30.62■■■□□ 2.49
CPSF6-205ENST00000550075 CWC22Q9HCG8 908 aaKnown RBP30.62■■■□□ 2.49
CPSF6-205ENST00000550075 RLFQ13129 1914 aa30.62■■■□□ 2.49
CPSF6-205ENST00000550075 CCDC85CA6NKD9 419 aa30.61■■■□□ 2.49
CPSF6-205ENST00000550075 PTH1RQ03431 593 aa30.61■■■□□ 2.49
CPSF6-205ENST00000550075 KRT23Q9C075 422 aa30.61■■■□□ 2.49
CPSF6-205ENST00000550075 IL17RBQ9NRM6 502 aa30.61■■■□□ 2.49
CPSF6-205ENST00000550075 CAPN15O75808 1086 aa30.6■■■□□ 2.49
CPSF6-205ENST00000550075 SLC9C1Q4G0N8 1177 aa30.6■■■□□ 2.49
CPSF6-205ENST00000550075 CCDC178Q5BJE1 867 aa30.6■■■□□ 2.49
CPSF6-205ENST00000550075 SAMD1Q6SPF0 538 aaPredicted RBP30.6■■■□□ 2.49
CPSF6-205ENST00000550075 NMT2O60551 498 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms