RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 CNNM2Q9H8M5 875 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 SEC31BQ9NQW1 1179 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 CHD4Q14839 1912 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 NUP98P52948 1817 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 A0A0U1RQJ8 604 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 GSG1L2A8MUP6 293 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 CASP14P31944 242 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 TDO2P48775 406 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 LRRC31Q6UY01 552 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 TRIM22Q8IYM9 498 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 CMTR1Q8N1G2 835 aaKnown RBP14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 ATRIPQ8WXE1 791 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 SUGCTQ9HAC7 445 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 LIMA1Q9UHB6 759 aaKnown RBP14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 MYO6Q9UM54 1294 aa14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 IQSEC3Q9UPP2 1182 aaPredicted RBP14.45□□□□□ -0.1
CALCOCO1-217ENST00000549935 CYP26C1Q6V0L0 522 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 LCORLQ8N3X6 602 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 KRT23Q9C075 422 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 PCDHB6Q9Y5E3 794 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 LRRIQ3A6PVS8 624 aaPredicted RBP14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 EIF3CLB5ME19 914 aaKnown RBP14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 PPP1R3GB7ZBB8 358 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 DEXIO95424 95 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 RHOXF2BP0C7M4 288 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 CD44P16070 742 aaKnown RBP14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 FXR1P51114 621 aaKnown RBP eCLIP14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 RTN1Q16799 776 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 GRAMD1CQ8IYS0 662 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 EIF3CQ99613 913 aaKnown RBP14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 RHOXF2Q9BQY4 288 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 CSRNP2Q9H175 543 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 ABHD10Q9NUJ1 306 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 BTG4Q9NY30 223 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 SLC4A4Q9Y6R1 1079 aa14.44□□□□□ -0.1
CALCOCO1-217ENST00000549935 BCL9O00512 1426 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 TARSL2A2RTX5 802 aaKnown RBP14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 PPFIA4O75335 1185 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 PRPF6O94906 941 aaKnown RBP14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 CPP00450 1065 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 ERVK-24P63145 666 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 SPAG1Q07617 926 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 DPYDQ12882 1025 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 WTAPQ15007 396 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 SART3Q15020 963 aaKnown RBP14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 MAP9Q49MG5 647 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 ZNF662Q6ZS27 426 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 TRAPPC11Q7Z392 1133 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 MIGA1Q8NAN2 632 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 CCDC148Q8NFR7 591 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 PPM1EQ8WY54 764 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 CCDC102AQ96A19 550 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 PAGE5Q96GU1 130 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 RPGRIP1Q96KN7 1286 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 CDC5LQ99459 802 aaKnown RBP14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 BRMS1Q9HCU9 246 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 TIAM2Q8IVF5 1701 aa14.43□□□□□ -0.1
CALCOCO1-217ENST00000549935 LRP5O75197 1615 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 CCDC196A0A1B0GTZ2 297 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 PSMD14O00487 310 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 USP14P54578 494 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 NR5A1Q13285 461 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 ICE2Q659A1 982 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 ZNF34Q8IZ26 560 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 CPLX3Q8WVH0 158 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 NACAP1Q9BZK3 213 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 ERICH2A1L162 156 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 ERVV-1B6SEH8 477 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 SYF2O95926 243 aaKnown RBP14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 BMP15O95972 392 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 ATP2B1P20020 1258 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 BCAMP50895 628 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 TTC31Q49AM3 519 aaPredicted RBP14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 CRACR2BQ8N4Y2 399 aaPredicted RBP14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 NOA1Q8NC60 698 aaKnown RBP14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 ACRBPQ8NEB7 543 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 STAG1Q8WVM7 1258 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 FERMT2Q96AC1 680 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 FAM204AQ9H8W3 233 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 ARAP2Q8WZ64 1704 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 SLIT2O94813 1529 aa14.42□□□□□ -0.1
CALCOCO1-217ENST00000549935 SUSD4Q5VX71 490 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 FOXR1Q6PIV2 292 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 TMTC2Q8N394 836 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 FAM107BQ9H098 131 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 DOCK2Q92608 1830 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 IL6STP40189 918 aaPredicted RBP14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 PPP2R5BQ15173 497 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 EFCAB13Q8IY85 973 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 OXER1Q8TDS5 423 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 AFAP1L1Q8TED9 768 aa14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 ZC3H4Q9UPT8 1303 aaKnown RBP14.41□□□□□ -0.1
CALCOCO1-217ENST00000549935 A0A087X0B3 334 aa14.4□□□□□ -0.1
CALCOCO1-217ENST00000549935 SHOX2O60902 331 aaPredicted RBP14.4□□□□□ -0.1
CALCOCO1-217ENST00000549935 RNF40O75150 1001 aa14.4□□□□□ -0.1
CALCOCO1-217ENST00000549935 GNAT2P19087 354 aa14.4□□□□□ -0.1
CALCOCO1-217ENST00000549935 KRT31Q15323 416 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms