RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 USP17L5A8MUK1 530 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 SNHG28P0DPA3 235 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 IFNAR1P17181 557 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 RXRAP19793 462 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 ASPRV1Q53RT3 343 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 ARMC9Q7Z3E5 817 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 SIAH1Q8IUQ4 282 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 LRRC47Q8N1G4 583 aaKnown RBP20.25■□□□□ 0.83
LETMD1-220ENST00000549686 SPRYD3Q8NCJ5 442 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 NSUN7Q8NE18 718 aaKnown RBP20.25■□□□□ 0.83
LETMD1-220ENST00000549686 ZNF526Q8TF50 670 aaPredicted RBP20.25■□□□□ 0.83
LETMD1-220ENST00000549686 FAM217BQ9NTX9 383 aaPredicted RBP20.25■□□□□ 0.83
LETMD1-220ENST00000549686 TMX2Q9Y320 296 aa20.25■□□□□ 0.83
LETMD1-220ENST00000549686 PARP1P09874 1014 aaKnown RBP20.24■□□□□ 0.83
LETMD1-220ENST00000549686 POTEIP0CG38 1075 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 POTEJP0CG39 1038 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 PDCP20941 246 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 CDC27P30260 824 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 INPP5BP32019 993 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 ADD1P35611 737 aaKnown RBP20.24■□□□□ 0.83
LETMD1-220ENST00000549686 FKBP1BP68106 108 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 SHROOM1Q2M3G4 852 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-220ENST00000549686 GPATCH4Q5T3I0 446 aaKnown RBP20.24■□□□□ 0.83
LETMD1-220ENST00000549686 MAP1SQ66K74 1059 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-220ENST00000549686 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 CLEC10AQ8IUN9 316 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 DCAF4Q8WV16 495 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 GOPCQ9HD26 462 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 RBM27Q9P2N5 1060 aaKnown RBP20.24■□□□□ 0.83
LETMD1-220ENST00000549686 CSADQ9Y600 493 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 STK36Q9NRP7 1315 aa20.24■□□□□ 0.83
LETMD1-220ENST00000549686 PTPDC1A2A3K4 754 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 PALM3A6NDB9 673 aaPredicted RBP20.23■□□□□ 0.83
LETMD1-220ENST00000549686 CTDNEP1O95476 244 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 PDHBP11177 359 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 NTRK3Q16288 839 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 CHADLQ6NUI6 762 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 TMTC3Q6ZXV5 915 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 TRIM22Q8IYM9 498 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 GMCL1Q96IK5 515 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 WDR18Q9BV38 432 aa20.23■□□□□ 0.83
LETMD1-220ENST00000549686 GPBP1L1Q9HC44 474 aaPredicted RBP20.23■□□□□ 0.83
LETMD1-220ENST00000549686 GJB2P29033 226 aa20.22■□□□□ 0.83
LETMD1-220ENST00000549686 DDIT3P35638 169 aa20.22■□□□□ 0.83
LETMD1-220ENST00000549686 SLFN13Q68D06 897 aa20.22■□□□□ 0.83
LETMD1-220ENST00000549686 ANKRD13AQ8IZ07 590 aa20.22■□□□□ 0.83
LETMD1-220ENST00000549686 FAM184AQ8NB25 1140 aa20.22■□□□□ 0.83
LETMD1-220ENST00000549686 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
LETMD1-220ENST00000549686 WASF1Q92558 559 aa20.22■□□□□ 0.83
LETMD1-220ENST00000549686 F5H6K3 240 aa20.21■□□□□ 0.83
LETMD1-220ENST00000549686 FMNL1O95466 1100 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-220ENST00000549686 PTPRAP18433 802 aa20.21■□□□□ 0.83
LETMD1-220ENST00000549686 USP14P54578 494 aa20.21■□□□□ 0.83
LETMD1-220ENST00000549686 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
LETMD1-220ENST00000549686 KLRC3Q07444 240 aa20.21■□□□□ 0.83
LETMD1-220ENST00000549686 SSRP1Q08945 709 aaKnown RBP20.21■□□□□ 0.83
LETMD1-220ENST00000549686 TTLL12Q14166 644 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-220ENST00000549686 ZKSCAN4Q969J2 545 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-220ENST00000549686 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-220ENST00000549686 KIAA1683Q9H0B3 1180 aa20.21■□□□□ 0.83
LETMD1-220ENST00000549686 CHMP5Q9NZZ3 219 aa20.21■□□□□ 0.83
LETMD1-220ENST00000549686 MAD2L2Q9UI95 211 aa20.21■□□□□ 0.83
LETMD1-220ENST00000549686 A0A1W2PRG0 241 aa20.2■□□□□ 0.82
LETMD1-220ENST00000549686 JAK2O60674 1132 aa20.2■□□□□ 0.82
LETMD1-220ENST00000549686 SLC1A4P43007 532 aa20.2■□□□□ 0.82
LETMD1-220ENST00000549686 NUCB2P80303 420 aa20.2■□□□□ 0.82
LETMD1-220ENST00000549686 ZNF543Q08ER8 600 aa20.2■□□□□ 0.82
LETMD1-220ENST00000549686 LPAR1Q92633 364 aa20.2■□□□□ 0.82
LETMD1-220ENST00000549686 FEZ1Q99689 392 aa20.2■□□□□ 0.82
LETMD1-220ENST00000549686 VCPKMTQ9H867 229 aa20.2■□□□□ 0.82
LETMD1-220ENST00000549686 ORC3Q9UBD5 711 aaPredicted RBP20.2■□□□□ 0.82
LETMD1-220ENST00000549686 POLR2AP24928 1970 aaKnown RBP20.2■□□□□ 0.82
LETMD1-220ENST00000549686 KLRF2D3W0D1 207 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 NDUFB10O96000 172 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 FUT2Q10981 343 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 PRKG1Q13976 671 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 VGLL4Q14135 290 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 USP17L2Q6R6M4 530 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 DLK2Q6UY11 383 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.19■□□□□ 0.82
LETMD1-220ENST00000549686 ZNF280CQ8ND82 737 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 ACER1Q8TDN7 264 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 SPZ1Q9BXG8 430 aa20.19■□□□□ 0.82
LETMD1-220ENST00000549686 C19orf81C9J6K1 198 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 USP17L10C9JJH3 530 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 PRPF3O43395 683 aaKnown RBP20.18■□□□□ 0.82
LETMD1-220ENST00000549686 PLEKHA8P1O95397 391 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 DEXIO95424 95 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 CCDC96Q2M329 555 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 NBPF11Q86T75 865 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 RBM46Q8TBY0 533 aaKnown RBP20.18■□□□□ 0.82
LETMD1-220ENST00000549686 DDX11Q96FC9 970 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 SLC26A6Q9BXS9 759 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 MTMR7Q9Y216 660 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 SNCAIPQ9Y6H5 919 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 DOCK1Q14185 1865 aa20.18■□□□□ 0.82
LETMD1-220ENST00000549686 TRAF5O00463 557 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms