RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 CNMDO75829 334 aa28.89■■■□□ 2.22
USP44-205ENST00000549639 SIAH1Q8IUQ4 282 aa28.89■■■□□ 2.22
USP44-205ENST00000549639 ZNF287Q9HBT7 754 aa28.89■■■□□ 2.22
USP44-205ENST00000549639 ROBO3Q96MS0 1386 aa28.88■■■□□ 2.21
USP44-205ENST00000549639 NACAP1Q9BZK3 213 aa28.88■■■□□ 2.21
USP44-205ENST00000549639 VCPKMTQ9H867 229 aa28.88■■■□□ 2.21
USP44-205ENST00000549639 PLXNB2O15031 1838 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 PATL2C9JE40 543 aaKnown RBP28.87■■■□□ 2.21
USP44-205ENST00000549639 SMIM22K7EJ46 135 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 CYP2B6P20813 491 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 RGS2P41220 211 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 TDO2P48775 406 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 MORN1Q5T089 497 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 MB21D1Q8N884 522 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 USP6NLQ92738 828 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 TANGO6Q9C0B7 1094 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 MKNK2Q9HBH9 465 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 STAP2Q9UGK3 403 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 RPTORQ8N122 1335 aa28.87■■■□□ 2.21
USP44-205ENST00000549639 M0R2C6 588 aa28.86■■■□□ 2.21
USP44-205ENST00000549639 APPP05067 770 aa28.86■■■□□ 2.21
USP44-205ENST00000549639 UBE2Q1Q7Z7E8 422 aa28.86■■■□□ 2.21
USP44-205ENST00000549639 TICAM2Q86XR7 235 aa28.86■■■□□ 2.21
USP44-205ENST00000549639 DEFB118Q96PH6 123 aa28.86■■■□□ 2.21
USP44-205ENST00000549639 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.86■■■□□ 2.21
USP44-205ENST00000549639 HMX1Q9NP08 348 aaPredicted RBP28.86■■■□□ 2.21
USP44-205ENST00000549639 MINDY4BA8MYZ0 360 aa28.85■■■□□ 2.21
USP44-205ENST00000549639 WDR46O15213 610 aaKnown RBP28.85■■■□□ 2.21
USP44-205ENST00000549639 ZMYM1Q5SVZ6 1142 aa28.85■■■□□ 2.21
USP44-205ENST00000549639 TRIB2Q92519 343 aa28.85■■■□□ 2.21
USP44-205ENST00000549639 HTATIP2Q9BUP3 242 aa28.85■■■□□ 2.21
USP44-205ENST00000549639 RWDD1Q9H446 243 aaPredicted RBP28.85■■■□□ 2.21
USP44-205ENST00000549639 BTBD7Q9P203 1132 aa28.85■■■□□ 2.21
USP44-205ENST00000549639 TFRCP02786 760 aaKnown RBP28.84■■■□□ 2.21
USP44-205ENST00000549639 EEF2P13639 858 aaKnown RBP28.84■■■□□ 2.21
USP44-205ENST00000549639 IFNL3Q8IZI9 196 aa28.84■■■□□ 2.21
USP44-205ENST00000549639 EVI5LQ96CN4 794 aa28.84■■■□□ 2.21
USP44-205ENST00000549639 APBA2Q99767 749 aa28.84■■■□□ 2.21
USP44-205ENST00000549639 CRISPLD2Q9H0B8 497 aa28.84■■■□□ 2.21
USP44-205ENST00000549639 EPB41L4AQ9HCS5 686 aaPredicted RBP28.84■■■□□ 2.21
USP44-205ENST00000549639 GOPCQ9HD26 462 aa28.84■■■□□ 2.21
USP44-205ENST00000549639 IVNS1ABPQ9Y6Y0 642 aa28.84■■■□□ 2.21
USP44-205ENST00000549639 SLC15A5A6NIM6 579 aa28.83■■■□□ 2.21
USP44-205ENST00000549639 FARP2O94887 1054 aaPredicted RBP28.83■■■□□ 2.21
USP44-205ENST00000549639 ZKSCAN1P17029 563 aaPredicted RBP28.83■■■□□ 2.21
USP44-205ENST00000549639 RASA1P20936 1047 aa28.83■■■□□ 2.21
USP44-205ENST00000549639 DSG3P32926 999 aa28.83■■■□□ 2.21
USP44-205ENST00000549639 MAP2K5Q13163 448 aa28.83■■■□□ 2.21
USP44-205ENST00000549639 CLEC10AQ8IUN9 316 aa28.83■■■□□ 2.21
USP44-205ENST00000549639 FLOT1O75955 427 aa28.82■■■□□ 2.2
USP44-205ENST00000549639 PTPREP23469 700 aa28.82■■■□□ 2.2
USP44-205ENST00000549639 PDE1AP54750 535 aa28.82■■■□□ 2.2
USP44-205ENST00000549639 ATP2B2Q01814 1243 aa28.82■■■□□ 2.2
USP44-205ENST00000549639 KIAA1755Q5JYT7 1200 aa28.82■■■□□ 2.2
USP44-205ENST00000549639 MAP3K21Q5TCX8 1036 aa28.82■■■□□ 2.2
USP44-205ENST00000549639 WDR78Q5VTH9 848 aa28.81■■■□□ 2.2
USP44-205ENST00000549639 SPICE1Q8N0Z3 855 aa28.81■■■□□ 2.2
USP44-205ENST00000549639 ANKLE1Q8NAG6 615 aa28.81■■■□□ 2.2
USP44-205ENST00000549639 SHCBP1Q8NEM2 672 aa28.81■■■□□ 2.2
USP44-205ENST00000549639 STRNO43815 780 aa28.8■■■□□ 2.2
USP44-205ENST00000549639 SLC3A2P08195 630 aaKnown RBP28.8■■■□□ 2.2
USP44-205ENST00000549639 SMC5Q8IY18 1101 aa28.8■■■□□ 2.2
USP44-205ENST00000549639 ZNF444Q8N0Y2 327 aaPredicted RBP28.8■■■□□ 2.2
USP44-205ENST00000549639 SEC62Q99442 399 aaKnown RBP28.8■■■□□ 2.2
USP44-205ENST00000549639 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.8■■■□□ 2.2
USP44-205ENST00000549639 SPATC1LQ9H0A9 340 aa28.8■■■□□ 2.2
USP44-205ENST00000549639 NYAP2Q9P242 653 aa28.8■■■□□ 2.2
USP44-205ENST00000549639 GREB1LQ9C091 1923 aaPredicted RBP28.79■■■□□ 2.2
USP44-205ENST00000549639 HOXC6P09630 235 aa28.79■■■□□ 2.2
USP44-205ENST00000549639 PRKAR2AP13861 404 aaKnown RBP28.79■■■□□ 2.2
USP44-205ENST00000549639 GRB14Q14449 540 aa28.79■■■□□ 2.2
USP44-205ENST00000549639 NAPBQ9H115 298 aa28.79■■■□□ 2.2
USP44-205ENST00000549639 A0A0G2JMZ2 1700 aa28.78■■■□□ 2.2
USP44-205ENST00000549639 PDE4BQ07343 736 aa28.78■■■□□ 2.2
USP44-205ENST00000549639 TRIM32Q13049 653 aa28.78■■■□□ 2.2
USP44-205ENST00000549639 MOV10L1Q9BXT6 1211 aaKnown RBP28.78■■■□□ 2.2
USP44-205ENST00000549639 RLFQ13129 1914 aa28.78■■■□□ 2.2
USP44-205ENST00000549639 DPF3Q92784 378 aa28.77■■■□□ 2.2
USP44-205ENST00000549639 MROH8Q9H579 483 aa28.77■■■□□ 2.2
USP44-205ENST00000549639 SYNPO2Q9UMS6 1093 aa28.77■■■□□ 2.2
USP44-205ENST00000549639 STK11IPQ8N1F8 1099 aa28.76■■■□□ 2.19
USP44-205ENST00000549639 ATG4CQ96DT6 458 aa28.76■■■□□ 2.19
USP44-205ENST00000549639 HELLSQ9NRZ9 838 aa28.76■■■□□ 2.19
USP44-205ENST00000549639 ADAMTS5Q9UNA0 930 aa28.76■■■□□ 2.19
USP44-205ENST00000549639 CACNB2Q08289 660 aaPredicted RBP28.75■■■□□ 2.19
USP44-205ENST00000549639 MFSD14CQ5VZR4 134 aa28.75■■■□□ 2.19
USP44-205ENST00000549639 IGKV6D-41A0A0C4DH26 115 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 SLC25A27O95847 323 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 ERCC3P19447 782 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 PPARAQ07869 468 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 CCL14Q16627 93 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 NECAB2Q7Z6G3 386 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 ABRAQ8N0Z2 381 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 LNPKQ9C0E8 428 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 SLC5A4Q9NY91 659 aa28.74■■■□□ 2.19
USP44-205ENST00000549639 SLC34A2O95436 690 aa28.73■■■□□ 2.19
USP44-205ENST00000549639 PPP4R3BQ5MIZ7 849 aa28.73■■■□□ 2.19
USP44-205ENST00000549639 MKL1Q969V6 931 aa28.73■■■□□ 2.19
USP44-205ENST00000549639 OGDHLQ9ULD0 1010 aa28.73■■■□□ 2.19
USP44-205ENST00000549639 PPP1R9AQ9ULJ8 1098 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms