RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 FAM86C1Q9NVL1 165 aa12.33□□□□□ -0.44
PRIM1-204ENST00000549549 SLC52A1Q9NWF4 448 aa12.33□□□□□ -0.44
PRIM1-204ENST00000549549 LRP2BPQ9P2M1 347 aa12.33□□□□□ -0.44
PRIM1-204ENST00000549549 PABPC1P11940 636 aaKnown RBP12.32□□□□□ -0.44
PRIM1-204ENST00000549549 SUMO1P63165 101 aaKnown RBP12.32□□□□□ -0.44
PRIM1-204ENST00000549549 TRIM61Q5EBN2 209 aa12.32□□□□□ -0.44
PRIM1-204ENST00000549549 CT47A1Q5JQC4 288 aaPredicted RBP12.32□□□□□ -0.44
PRIM1-204ENST00000549549 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
PRIM1-204ENST00000549549 LRRTM3Q86VH5 581 aa12.32□□□□□ -0.44
PRIM1-204ENST00000549549 DPH2Q9BQC3 489 aaPredicted RBP12.32□□□□□ -0.44
PRIM1-204ENST00000549549 TARS2Q9BW92 718 aaKnown RBP12.32□□□□□ -0.44
PRIM1-204ENST00000549549 DLL1O00548 723 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 OIP5O43482 229 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 SDSP20132 328 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 MAP7Q14244 749 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 TTLL4Q14679 1199 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 DUOXA2Q1HG44 320 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 PRAMEF13Q5VWM6 474 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 UBE3DQ7Z6J8 389 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 FMNL3Q8IVF7 1028 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 UBR7Q8N806 425 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 SMG8Q8ND04 991 aaKnown RBP12.31□□□□□ -0.44
PRIM1-204ENST00000549549 PPP1R13LQ8WUF5 828 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 MRGPRX3Q96LB0 322 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 FGD4Q96M96 766 aa12.31□□□□□ -0.44
PRIM1-204ENST00000549549 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
PRIM1-204ENST00000549549 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
PRIM1-204ENST00000549549 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
PRIM1-204ENST00000549549 CCDC144CPQ8IYA2 1237 aa12.3□□□□□ -0.44
PRIM1-204ENST00000549549 BVESQ8NE79 360 aa12.3□□□□□ -0.44
PRIM1-204ENST00000549549 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
PRIM1-204ENST00000549549 RCC1LQ96I51 464 aaKnown RBP12.3□□□□□ -0.44
PRIM1-204ENST00000549549 ZNF451Q9Y4E5 1061 aa12.3□□□□□ -0.44
PRIM1-204ENST00000549549 COL17A1Q9UMD9 1497 aaPredicted RBP12.29□□□□□ -0.44
PRIM1-204ENST00000549549 PRODHO43272 600 aa12.29□□□□□ -0.44
PRIM1-204ENST00000549549 ADAMTS2O95450 1211 aa12.29□□□□□ -0.44
PRIM1-204ENST00000549549 ADH5P11766 374 aa12.29□□□□□ -0.44
PRIM1-204ENST00000549549 GRIA2P42262 883 aa12.29□□□□□ -0.44
PRIM1-204ENST00000549549 VWCEQ96DN2 955 aa12.29□□□□□ -0.44
PRIM1-204ENST00000549549 GBP3Q9H0R5 595 aa12.29□□□□□ -0.44
PRIM1-204ENST00000549549 WHRNQ9P202 907 aa12.29□□□□□ -0.44
PRIM1-204ENST00000549549 FAM83GA6ND36 823 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 EYA4O95677 639 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 POU3F2P20265 443 aaPredicted RBP12.28□□□□□ -0.44
PRIM1-204ENST00000549549 KRT76Q01546 638 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 SOX4Q06945 474 aaPredicted RBP12.28□□□□□ -0.44
PRIM1-204ENST00000549549 NBPF12Q5TAG4 269 aaPredicted RBP12.28□□□□□ -0.44
PRIM1-204ENST00000549549 KIAA1211Q6ZU35 1233 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 ISL2Q96A47 359 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 POLR3GLQ9BT43 218 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
PRIM1-204ENST00000549549 FOXQ1Q9C009 403 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 TRIM39Q9HCM9 518 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 EMC9Q9Y3B6 208 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 EID1Q9Y6B2 187 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 WASHC2CQ9Y4E1 1318 aa12.28□□□□□ -0.44
PRIM1-204ENST00000549549 SHISA8B8ZZ34 492 aa12.27□□□□□ -0.45
PRIM1-204ENST00000549549 SHOXO15266 292 aa12.27□□□□□ -0.45
PRIM1-204ENST00000549549 PPM1BO75688 479 aa12.27□□□□□ -0.45
PRIM1-204ENST00000549549 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.45
PRIM1-204ENST00000549549 CD247P20963 164 aa12.27□□□□□ -0.45
PRIM1-204ENST00000549549 NUTM2GQ5VZR2 741 aa12.27□□□□□ -0.45
PRIM1-204ENST00000549549 LGR4Q9BXB1 951 aa12.27□□□□□ -0.45
PRIM1-204ENST00000549549 CYP4F12Q9HCS2 524 aa12.27□□□□□ -0.45
PRIM1-204ENST00000549549 ARID4BQ4LE39 1312 aaPredicted RBP12.27□□□□□ -0.45
PRIM1-204ENST00000549549 A0A087WZG4 1122 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 LCE2BO14633 110 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 DNAJC8O75937 253 aaPredicted RBP12.26□□□□□ -0.45
PRIM1-204ENST00000549549 WISP1O95388 367 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 CNNM4Q6P4Q7 775 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 ADAT2Q7Z6V5 191 aaKnown RBP12.26□□□□□ -0.45
PRIM1-204ENST00000549549 C7orf61Q8IZ16 206 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 PPM1KQ8N3J5 372 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 ARHGEF39Q8N4T4 335 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 GSTCDQ8NEC7 633 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 PPP1R14AQ96A00 147 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 ZNF512BQ96KM6 892 aaPredicted RBP12.26□□□□□ -0.45
PRIM1-204ENST00000549549 RNF208Q9H0X6 261 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 AP4E1Q9UPM8 1137 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 CEP131Q9UPN4 1083 aa12.26□□□□□ -0.45
PRIM1-204ENST00000549549 NOP56O00567 594 aaKnown RBP12.25□□□□□ -0.45
PRIM1-204ENST00000549549 TBX1O43435 398 aa12.25□□□□□ -0.45
PRIM1-204ENST00000549549 TIAF1O95411 115 aa12.25□□□□□ -0.45
PRIM1-204ENST00000549549 NPTXRO95502 500 aa12.25□□□□□ -0.45
PRIM1-204ENST00000549549 AUHQ13825 339 aaKnown RBP12.25□□□□□ -0.45
PRIM1-204ENST00000549549 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
PRIM1-204ENST00000549549 TRIM59Q8IWR1 403 aa12.25□□□□□ -0.45
PRIM1-204ENST00000549549 MFSD2AQ8NA29 543 aa12.25□□□□□ -0.45
PRIM1-204ENST00000549549 DNAJB8Q8NHS0 232 aa12.25□□□□□ -0.45
PRIM1-204ENST00000549549 SLC7A14Q8TBB6 771 aa12.25□□□□□ -0.45
PRIM1-204ENST00000549549 SFMBT1Q9UHJ3 866 aa12.25□□□□□ -0.45
PRIM1-204ENST00000549549 LRIG2O94898 1065 aa12.24□□□□□ -0.45
PRIM1-204ENST00000549549 BCRP11274 1271 aa12.24□□□□□ -0.45
PRIM1-204ENST00000549549 STRA8Q7Z7C7 330 aa12.24□□□□□ -0.45
PRIM1-204ENST00000549549 FMR1NBQ8N0W7 255 aaPredicted RBP12.24□□□□□ -0.45
PRIM1-204ENST00000549549 AHI1Q8N157 1196 aa12.24□□□□□ -0.45
PRIM1-204ENST00000549549 GP6Q9HCN6 339 aa12.24□□□□□ -0.45
PRIM1-204ENST00000549549 GEMIN8Q9NWZ8 242 aaKnown RBP12.24□□□□□ -0.45
PRIM1-204ENST00000549549 SLURP2P0DP57 97 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms