RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 LBX2Q6XYB7 198 aa23.46■■□□□ 1.35
SLC48A1-207ENST00000549243 RPTORQ8N122 1335 aa23.46■■□□□ 1.35
SLC48A1-207ENST00000549243 HTATIP2Q9BUP3 242 aa23.46■■□□□ 1.35
SLC48A1-207ENST00000549243 ARPP21Q9UBL0 812 aaPredicted RBP23.46■■□□□ 1.35
SLC48A1-207ENST00000549243 TTC41PQ6P2S7 1318 aa23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 GSG1L2A8MUP6 293 aa23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 XRCC5P13010 732 aaKnown RBP23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 PRKAR2AP13861 404 aaKnown RBP23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 ZKSCAN1P17029 563 aaPredicted RBP23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 RGS2P41220 211 aa23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 SAMD1Q6SPF0 538 aaPredicted RBP23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 PI4K2BQ8TCG2 481 aa23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 USP6NLQ92738 828 aa23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 CRISPLD2Q9H0B8 497 aa23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 ALPK3Q96L96 1907 aa23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 COL11A1P12107 1806 aaPredicted RBP23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 A0A0G2JMZ2 1700 aa23.45■■□□□ 1.34
SLC48A1-207ENST00000549243 MINDY4BA8MYZ0 360 aa23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 M0R2C6 588 aa23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 ERC2O15083 957 aa23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 GPAA1O43292 621 aa23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 ZFYP08048 801 aaPredicted RBP23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 COG2Q14746 738 aa23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 APBA2Q99767 749 aa23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 SH2D4AQ9H788 454 aa23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 TMX2Q9Y320 296 aa23.44■■□□□ 1.34
SLC48A1-207ENST00000549243 GREB1LQ9C091 1923 aaPredicted RBP23.43■■□□□ 1.34
SLC48A1-207ENST00000549243 GLRX3O76003 335 aaKnown RBP23.43■■□□□ 1.34
SLC48A1-207ENST00000549243 EEF2P13639 858 aaKnown RBP23.43■■□□□ 1.34
SLC48A1-207ENST00000549243 MAP2K5Q13163 448 aa23.43■■□□□ 1.34
SLC48A1-207ENST00000549243 HABP4Q5JVS0 413 aaKnown RBP23.43■■□□□ 1.34
SLC48A1-207ENST00000549243 DIS3LQ8TF46 1054 aaKnown RBP23.43■■□□□ 1.34
SLC48A1-207ENST00000549243 VCPKMTQ9H867 229 aa23.43■■□□□ 1.34
SLC48A1-207ENST00000549243 HOXC10Q9NYD6 342 aa23.43■■□□□ 1.34
SLC48A1-207ENST00000549243 MYH4Q9Y623 1939 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 FLOT1O75955 427 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 APPP05067 770 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 MX1P20591 662 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 SBK1Q52WX2 424 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 MAP3K21Q5TCX8 1036 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 TRMT44Q8IYL2 757 aaKnown RBP23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 LPAR1Q92633 364 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 PAWRQ96IZ0 340 aaKnown RBP23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 SEC62Q99442 399 aaKnown RBP23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 FSD1Q9BTV5 496 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 EPB41L4AQ9HCS5 686 aaPredicted RBP23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 ZBTB47Q9UFB7 747 aaPredicted RBP23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 IVNS1ABPQ9Y6Y0 642 aa23.42■■□□□ 1.34
SLC48A1-207ENST00000549243 TRIOBPQ9H2D6 2365 aa23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 RAD21O60216 631 aa23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 PTPREP23469 700 aa23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 TDO2P48775 406 aa23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 CACNB2Q08289 660 aaPredicted RBP23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 ANKRD45Q5TZF3 282 aa23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 GIMAP6Q6P9H5 292 aa23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 KANSL2Q9H9L4 492 aa23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 COLQQ9Y215 455 aaPredicted RBP23.41■■□□□ 1.34
SLC48A1-207ENST00000549243 ZNFX1Q9P2E3 1918 aaKnown RBP23.4■■□□□ 1.34
SLC48A1-207ENST00000549243 SLC15A5A6NIM6 579 aa23.4■■□□□ 1.34
SLC48A1-207ENST00000549243 PLS1Q14651 629 aa23.4■■□□□ 1.34
SLC48A1-207ENST00000549243 LRRFIP1Q32MZ4 808 aaKnown RBP23.4■■□□□ 1.34
SLC48A1-207ENST00000549243 ATG4CQ96DT6 458 aa23.4■■□□□ 1.34
SLC48A1-207ENST00000549243 MOV10L1Q9BXT6 1211 aaKnown RBP23.4■■□□□ 1.34
SLC48A1-207ENST00000549243 MKNK2Q9HBH9 465 aa23.4■■□□□ 1.34
SLC48A1-207ENST00000549243 FRMPD3Q5JV73 1810 aa23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 CAPN2P17655 700 aa23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 GNAT2P19087 354 aa23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 RASA1P20936 1047 aa23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 CCND3P30281 292 aaPredicted RBP23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 DSG3P32926 999 aa23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 SPATC1LQ9H0A9 340 aa23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 FLRT1Q9NZU1 646 aa23.39■■□□□ 1.33
SLC48A1-207ENST00000549243 WDR46O15213 610 aaKnown RBP23.38■■□□□ 1.33
SLC48A1-207ENST00000549243 NECAB2Q7Z6G3 386 aa23.38■■□□□ 1.33
SLC48A1-207ENST00000549243 ROBO3Q96MS0 1386 aa23.38■■□□□ 1.33
SLC48A1-207ENST00000549243 SALL3Q9BXA9 1300 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 PRDM1O75626 825 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 ERCC3P19447 782 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 GRB14Q14449 540 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 CHRDL2Q6WN34 429 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 IFNL3Q8IZI9 196 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 ANKLE1Q8NAG6 615 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 NPLOC4Q8TAT6 608 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 GOPCQ9HD26 462 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 FBXO28Q9NVF7 368 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 NR2E3Q9Y5X4 410 aa23.37■■□□□ 1.33
SLC48A1-207ENST00000549243 ZNF236Q9UL36 1845 aa23.36■■□□□ 1.33
SLC48A1-207ENST00000549243 PATL2C9JE40 543 aaKnown RBP23.36■■□□□ 1.33
SLC48A1-207ENST00000549243 EVI5O60447 810 aa23.36■■□□□ 1.33
SLC48A1-207ENST00000549243 ZMYM1Q5SVZ6 1142 aa23.36■■□□□ 1.33
SLC48A1-207ENST00000549243 MB21D1Q8N884 522 aa23.36■■□□□ 1.33
SLC48A1-207ENST00000549243 OGDHLQ9ULD0 1010 aa23.36■■□□□ 1.33
SLC48A1-207ENST00000549243 HDAC1Q13547 482 aaPredicted RBP23.35■■□□□ 1.33
SLC48A1-207ENST00000549243 FAM83BQ5T0W9 1011 aa23.35■■□□□ 1.33
SLC48A1-207ENST00000549243 MFSD14CQ5VZR4 134 aa23.35■■□□□ 1.33
SLC48A1-207ENST00000549243 NCAPG2Q86XI2 1143 aa23.35■■□□□ 1.33
SLC48A1-207ENST00000549243 ADORA2AP29274 412 aa23.34■■□□□ 1.33
SLC48A1-207ENST00000549243 MNX1P50219 401 aaPredicted RBP23.34■■□□□ 1.33
SLC48A1-207ENST00000549243 DPP9Q86TI2 863 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms