RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PICK1Q9NRD5 415 aa33.58■■■□□ 2.97
BRF1-213ENST00000548421 SYNPO2Q9UMS6 1093 aa33.58■■■□□ 2.97
BRF1-213ENST00000548421 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.58■■■□□ 2.97
BRF1-213ENST00000548421 MAP3K9P80192 1104 aa33.57■■■□□ 2.97
BRF1-213ENST00000548421 TTLL12Q14166 644 aaPredicted RBP33.57■■■□□ 2.97
BRF1-213ENST00000548421 MAP3K11Q16584 847 aa33.57■■■□□ 2.97
BRF1-213ENST00000548421 SPRYD3Q8NCJ5 442 aa33.57■■■□□ 2.97
BRF1-213ENST00000548421 CTCFLQ8NI51 663 aaPredicted RBP33.56■■■□□ 2.96
BRF1-213ENST00000548421 PHIPQ8WWQ0 1821 aa33.56■■■□□ 2.96
BRF1-213ENST00000548421 CCDC196A0A1B0GTZ2 297 aa33.56■■■□□ 2.96
BRF1-213ENST00000548421 USP17L5A8MUK1 530 aa33.56■■■□□ 2.96
BRF1-213ENST00000548421 ARMC9Q7Z3E5 817 aa33.56■■■□□ 2.96
BRF1-213ENST00000548421 SH2D4AQ9H788 454 aa33.56■■■□□ 2.96
BRF1-213ENST00000548421 FOXD4L1Q9NU39 408 aa33.56■■■□□ 2.96
BRF1-213ENST00000548421 RBM28Q9NW13 759 aaKnown RBP33.56■■■□□ 2.96
BRF1-213ENST00000548421 TRPM7Q96QT4 1865 aa33.55■■■□□ 2.96
BRF1-213ENST00000548421 CDC27P30260 824 aa33.55■■■□□ 2.96
BRF1-213ENST00000548421 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.55■■■□□ 2.96
BRF1-213ENST00000548421 LLPHQ9BRT6 129 aaKnown RBP33.55■■■□□ 2.96
BRF1-213ENST00000548421 ZNF408Q9H9D4 720 aa33.55■■■□□ 2.96
BRF1-213ENST00000548421 FAM217BQ9NTX9 383 aaPredicted RBP33.55■■■□□ 2.96
BRF1-213ENST00000548421 CSADQ9Y600 493 aa33.55■■■□□ 2.96
BRF1-213ENST00000548421 A0A1W2PRG0 241 aa33.54■■■□□ 2.96
BRF1-213ENST00000548421 CPLX1O14810 134 aa33.54■■■□□ 2.96
BRF1-213ENST00000548421 KIF5BP33176 963 aa33.54■■■□□ 2.96
BRF1-213ENST00000548421 FMR1Q06787 632 aaKnown RBP eCLIP33.54■■■□□ 2.96
BRF1-213ENST00000548421 VGLL4Q14135 290 aa33.54■■■□□ 2.96
BRF1-213ENST00000548421 GRM4Q14833 912 aa33.54■■■□□ 2.96
BRF1-213ENST00000548421 MTMR7Q9Y216 660 aa33.54■■■□□ 2.96
BRF1-213ENST00000548421 TMX2Q9Y320 296 aa33.54■■■□□ 2.96
BRF1-213ENST00000548421 PTPRAP18433 802 aa33.53■■■□□ 2.96
BRF1-213ENST00000548421 ADD1P35611 737 aaKnown RBP33.53■■■□□ 2.96
BRF1-213ENST00000548421 CCDC84Q86UT8 332 aaPredicted RBP33.53■■■□□ 2.96
BRF1-213ENST00000548421 ANKRD13AQ8IZ07 590 aa33.53■■■□□ 2.96
BRF1-213ENST00000548421 GMCL1P1Q8NEA9 526 aa33.53■■■□□ 2.96
BRF1-213ENST00000548421 ACER1Q8TDN7 264 aa33.53■■■□□ 2.96
BRF1-213ENST00000548421 KIF3CO14782 793 aa33.52■■■□□ 2.96
BRF1-213ENST00000548421 PDHBP11177 359 aa33.52■■■□□ 2.96
BRF1-213ENST00000548421 ECE1P42892 770 aa33.52■■■□□ 2.96
BRF1-213ENST00000548421 CPLX2Q6PUV4 134 aaKnown RBP33.52■■■□□ 2.96
BRF1-213ENST00000548421 AS3MTQ9HBK9 375 aa33.52■■■□□ 2.96
BRF1-213ENST00000548421 ITGBL1O95965 494 aaPredicted RBP33.51■■■□□ 2.96
BRF1-213ENST00000548421 SNHG28P0DPA3 235 aa33.51■■■□□ 2.96
BRF1-213ENST00000548421 MOB2Q70IA6 237 aa33.51■■■□□ 2.96
BRF1-213ENST00000548421 SNCAIPQ9Y6H5 919 aa33.51■■■□□ 2.96
BRF1-213ENST00000548421 CDKL5O76039 1030 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 CTDNEP1O95476 244 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 FKBP1BP68106 108 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 NSUN7Q8NE18 718 aaKnown RBP33.5■■■□□ 2.95
BRF1-213ENST00000548421 GOPCQ9HD26 462 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 MAD2L2Q9UI95 211 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 SMC3Q9UQE7 1217 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 F5H6K3 240 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 PARP1P09874 1014 aaKnown RBP33.5■■■□□ 2.95
BRF1-213ENST00000548421 KLRC3Q07444 240 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 WDR18Q9BV38 432 aa33.5■■■□□ 2.95
BRF1-213ENST00000548421 NTRK3Q16288 839 aa33.49■■■□□ 2.95
BRF1-213ENST00000548421 SLFN13Q68D06 897 aa33.49■■■□□ 2.95
BRF1-213ENST00000548421 RASGRP2Q7LDG7 609 aa33.49■■■□□ 2.95
BRF1-213ENST00000548421 SMARCC2Q8TAQ2 1214 aa33.49■■■□□ 2.95
BRF1-213ENST00000548421 FEZ1Q99689 392 aa33.49■■■□□ 2.95
BRF1-213ENST00000548421 PALM3A6NDB9 673 aaPredicted RBP33.48■■■□□ 2.95
BRF1-213ENST00000548421 RAD21O60216 631 aa33.48■■■□□ 2.95
BRF1-213ENST00000548421 CELF2O95319 508 aaKnown RBP33.48■■■□□ 2.95
BRF1-213ENST00000548421 GNAQP50148 359 aa33.48■■■□□ 2.95
BRF1-213ENST00000548421 ASPRV1Q53RT3 343 aa33.48■■■□□ 2.95
BRF1-213ENST00000548421 USP17L2Q6R6M4 530 aa33.48■■■□□ 2.95
BRF1-213ENST00000548421 TMTC3Q6ZXV5 915 aa33.48■■■□□ 2.95
BRF1-213ENST00000548421 DCAF4Q8WV16 495 aa33.48■■■□□ 2.95
BRF1-213ENST00000548421 GBA2Q9HCG7 927 aaPredicted RBP33.48■■■□□ 2.95
BRF1-213ENST00000548421 ZHX2Q9Y6X8 837 aa33.48■■■□□ 2.95
BRF1-213ENST00000548421 PTPDC1A2A3K4 754 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 UNCXA6NJT0 531 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 NDUFB10O96000 172 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 IFNAR1P17181 557 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 LDLRAD1Q5T700 205 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 ZNF280CQ8ND82 737 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 GMCL1Q96IK5 515 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 KIAA1683Q9H0B3 1180 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 VCPKMTQ9H867 229 aa33.47■■■□□ 2.95
BRF1-213ENST00000548421 CWC22Q9HCG8 908 aaKnown RBP33.47■■■□□ 2.95
BRF1-213ENST00000548421 MYH6P13533 1939 aa33.46■■■□□ 2.95
BRF1-213ENST00000548421 JAK2O60674 1132 aa33.46■■■□□ 2.95
BRF1-213ENST00000548421 HMGN5P82970 282 aaKnown RBP33.46■■■□□ 2.95
BRF1-213ENST00000548421 STAG2Q8N3U4 1231 aa33.46■■■□□ 2.95
BRF1-213ENST00000548421 USP17L10C9JJH3 530 aa33.45■■■□□ 2.95
BRF1-213ENST00000548421 UBE2Q2LH0YL09 131 aa33.45■■■□□ 2.95
BRF1-213ENST00000548421 PLEKHA8P1O95397 391 aa33.45■■■□□ 2.95
BRF1-213ENST00000548421 SLC1A4P43007 532 aa33.45■■■□□ 2.95
BRF1-213ENST00000548421 ZNF543Q08ER8 600 aa33.45■■■□□ 2.95
BRF1-213ENST00000548421 GPATCH4Q5T3I0 446 aaKnown RBP33.45■■■□□ 2.95
BRF1-213ENST00000548421 C2orf69Q8N8R5 385 aa33.45■■■□□ 2.95
BRF1-213ENST00000548421 LZTS2Q9BRK4 669 aa33.45■■■□□ 2.95
BRF1-213ENST00000548421 GOLGA8HP0CJ92 632 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 GJB2P29033 226 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 SPP2Q13103 211 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 CCDC96Q2M329 555 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 SMC1BQ8NDV3 1235 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 CLMNQ96JQ2 1002 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 ELP3Q9H9T3 547 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms