RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, human

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEPDC4-204	ENST00000547823	PPP1R13L	Q8WUF5	828 aa		4.65	□□□□□ -1.67
DEPDC4-204	ENST00000547823		Q96M66	194 aa		4.65	□□□□□ -1.67
DEPDC4-204	ENST00000547823	BIN2	Q9UBW5	565 aa	Predicted RBP	4.65	□□□□□ -1.67
DEPDC4-204	ENST00000547823	TJP2	Q9UDY2	1190 aa		4.65	□□□□□ -1.67
DEPDC4-204	ENST00000547823	GPR160	Q9UJ42	338 aa		4.65	□□□□□ -1.67
DEPDC4-204	ENST00000547823	TTF2	Q9UNY4	1162 aa	Known RBP	4.65	□□□□□ -1.67
DEPDC4-204	ENST00000547823	IRAK3	Q9Y616	596 aa		4.65	□□□□□ -1.67
DEPDC4-204	ENST00000547823	GFRA2	O00451	464 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	TRIM13	O60858	407 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ADRB1	P08588	477 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	MAPK1	P28482	360 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	PTPN11	Q06124	597 aa	Predicted RBP	4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	PRRT2	Q7Z6L0	340 aa	Predicted RBP	4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	MCAT	Q8IVS2	390 aa	Known RBP	4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	DTWD2	Q8NBA8	298 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	CYB5D2	Q8WUJ1	264 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	RNF141	Q8WVD5	230 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	OSBPL7	Q9BZF2	842 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	C19orf44	Q9H6X5	657 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	GCM1	Q9NP62	436 aa		4.64	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ABLIM1	O14639	778 aa		4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	USP17L7	P0C7H9	530 aa		4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	RLBP1	P12271	317 aa		4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	YARS	P54577	528 aa	Known RBP	4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	FMR1	Q06787	632 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ASPN	Q9BXN1	380 aa		4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	XYLT2	Q9H1B5	865 aa		4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	CRTAC1	Q9NQ79	661 aa		4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	PCDHA11	Q9Y5I1	949 aa		4.63	□□□□□ -1.67
DEPDC4-204	ENST00000547823	MAPK8	P45983	427 aa		4.62	□□□□□ -1.67
DEPDC4-204	ENST00000547823	AFF3	P51826	1226 aa	Known RBP	4.62	□□□□□ -1.67
DEPDC4-204	ENST00000547823	TEPSIN	Q96N21	525 aa		4.62	□□□□□ -1.67
DEPDC4-204	ENST00000547823	MIR1-1HG	Q9H1L0	117 aa		4.62	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SIRT5	Q9NXA8	310 aa		4.62	□□□□□ -1.67
DEPDC4-204	ENST00000547823	GNE	Q9Y223	722 aa	Known RBP	4.62	□□□□□ -1.67
DEPDC4-204	ENST00000547823	NES	P48681	1621 aa		4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	RBM47	A0AV96	593 aa	Known RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ZC3H12D	A2A288	527 aa	Known RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	PI3	P19957	117 aa		4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	RPL6	Q02878	288 aa	Known RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	TSNAXIP1	Q2TAA8	658 aa		4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SPATS1	Q496A3	300 aa		4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	TIGD5	Q53EQ6	642 aa		4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	RNF111	Q6ZNA4	994 aa		4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ENOX1	Q8TC92	643 aa	Known RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	LINC01599	Q8WXQ3	324 aa		4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	DACT3	Q96B18	629 aa	Predicted RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	DPH2	Q9BQC3	489 aa	Predicted RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	LUC7L	Q9NQ29	371 aa	Known RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	CNOT11	Q9UKZ1	510 aa	Known RBP	4.61	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SLC22A31	A6NKX4	558 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	N4BP3	O15049	544 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	KIR2DL1	P43626	348 aa	Predicted RBP	4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	KIR2DL2	P43627	348 aa	Predicted RBP	4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SRSF3	P84103	164 aa	Known RBP	4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	TEK	Q02763	1124 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	TMEM62	Q0P6H9	643 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SSPN	Q14714	243 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	CCDC85B	Q15834	202 aa	Predicted RBP	4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	CLEC16A	Q2KHT3	1053 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	AGMO	Q6ZNB7	445 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	NLRX1	Q86UT6	975 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	FBXO41	Q8TF61	875 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SHISA4	Q96DD7	197 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	MBD1	Q9UIS9	605 aa	Predicted RBP	4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	RIMBP3C	A6NJZ7	1639 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	RIMBP3B	A6NNM3	1639 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	RIMBP3	Q9UFD9	1639 aa		4.6	□□□□□ -1.67
DEPDC4-204	ENST00000547823	WASH4P	A8MWX3	477 aa		4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ENDOU	P21128	410 aa	Known RBP	4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SEPT6	Q14141	434 aa		4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ADGRF1	Q5T601	910 aa		4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	FRMD5	Q7Z6J6	570 aa		4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	CCDC84	Q86UT8	332 aa	Predicted RBP	4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	FAM13C	Q8NE31	585 aa		4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	ACSF2	Q96CM8	615 aa	Predicted RBP	4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	SGPP1	Q9BX95	441 aa		4.59	□□□□□ -1.67
DEPDC4-204	ENST00000547823	KIF21A	Q7Z4S6	1674 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	SMARCA2	P51531	1590 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	DCAF1	Q9Y4B6	1507 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	OTOL1	A6NHN0	477 aa	Predicted RBP	4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	IRS4	O14654	1257 aa	Predicted RBP	4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	NRDC	O43847	1150 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	EIF4B	P23588	611 aa	Known RBP	4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	CDK8	P49336	464 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	LIG3	P49916	1009 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	CHMP4BP1	P59074	171 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	YBX1	P67809	324 aa	Known RBP	4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	NFKB2	Q00653	900 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	CAP1	Q01518	475 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	SLC14A2	Q15849	920 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	TMEM201	Q5SNT2	666 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	SLFN12	Q8IYM2	578 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	ASB16	Q96NS5	453 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	ZNF281	Q9Y2X9	895 aa		4.58	□□□□□ -1.68
DEPDC4-204	ENST00000547823	PSPN	O60542	156 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms