RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 SAGE1Q9NXZ1 904 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 SLC45A1Q9Y2W3 748 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 RCSD1Q6JBY9 416 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 IQCA1Q86XH1 822 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 MB21D2Q8IYB1 491 aaPredicted RBP24.5■■□□□ 1.51
SCARB1-211ENST00000546215 SYNPO2Q9UMS6 1093 aa24.5■■□□□ 1.51
SCARB1-211ENST00000546215 CA12O43570 354 aa24.49■■□□□ 1.51
SCARB1-211ENST00000546215 ZKSCAN1P17029 563 aaPredicted RBP24.49■■□□□ 1.51
SCARB1-211ENST00000546215 VCAM1P19320 739 aa24.49■■□□□ 1.51
SCARB1-211ENST00000546215 LPAR1Q92633 364 aa24.49■■□□□ 1.51
SCARB1-211ENST00000546215 TTC14Q96N46 770 aa24.49■■□□□ 1.51
SCARB1-211ENST00000546215 CFHR5Q9BXR6 569 aa24.49■■□□□ 1.51
SCARB1-211ENST00000546215 EIF5BO60841 1220 aaKnown RBP24.48■■□□□ 1.51
SCARB1-211ENST00000546215 HSPA1AP0DMV8 641 aaKnown RBP24.48■■□□□ 1.51
SCARB1-211ENST00000546215 HSPA1BP0DMV9 641 aaKnown RBP24.48■■□□□ 1.51
SCARB1-211ENST00000546215 HOXA7P31268 230 aaPredicted RBP24.48■■□□□ 1.51
SCARB1-211ENST00000546215 COL9A3Q14050 684 aaPredicted RBP24.48■■□□□ 1.51
SCARB1-211ENST00000546215 LRRC47Q8N1G4 583 aaKnown RBP24.48■■□□□ 1.51
SCARB1-211ENST00000546215 ZSCAN10Q96SZ4 725 aaPredicted RBP24.48■■□□□ 1.51
SCARB1-211ENST00000546215 GOPCQ9HD26 462 aa24.48■■□□□ 1.51
SCARB1-211ENST00000546215 F5H6K3 240 aa24.47■■□□□ 1.51
SCARB1-211ENST00000546215 KLRC3Q07444 240 aa24.47■■□□□ 1.51
SCARB1-211ENST00000546215 ADCK5Q3MIX3 580 aa24.47■■□□□ 1.51
SCARB1-211ENST00000546215 CCDC178Q5BJE1 867 aa24.47■■□□□ 1.51
SCARB1-211ENST00000546215 DGKHQ86XP1 1220 aa24.47■■□□□ 1.51
SCARB1-211ENST00000546215 SPICE1Q8N0Z3 855 aa24.47■■□□□ 1.51
SCARB1-211ENST00000546215 PABPC4Q13310 644 aaKnown RBP eCLIP24.46■■□□□ 1.51
SCARB1-211ENST00000546215 TAF1CQ15572 869 aaPredicted RBP24.46■■□□□ 1.51
SCARB1-211ENST00000546215 ENAHQ8N8S7 591 aaPredicted RBP24.46■■□□□ 1.51
SCARB1-211ENST00000546215 GMCL1P1Q8NEA9 526 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 ANKS1AQ92625 1134 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 TMEM47Q9BQJ4 181 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 R3HDMLQ9H3Y0 253 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 SNX14Q9Y5W7 946 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 TNKSO95271 1327 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 TBC1D8O95759 1140 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 ANTXR2P58335 489 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 CRHR2Q13324 411 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 KRT32Q14532 448 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 CHST3Q7LGC8 479 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 UBAC1Q9BSL1 405 aa24.46■■□□□ 1.51
SCARB1-211ENST00000546215 RPAP3Q9H6T3 665 aaPredicted RBP24.46■■□□□ 1.51
SCARB1-211ENST00000546215 FOXN1O15353 648 aa24.45■■□□□ 1.5
SCARB1-211ENST00000546215 NDUFB10O96000 172 aa24.45■■□□□ 1.5
SCARB1-211ENST00000546215 CYP2C8P10632 490 aa24.45■■□□□ 1.5
SCARB1-211ENST00000546215 TOP1P11387 765 aaKnown RBP24.45■■□□□ 1.5
SCARB1-211ENST00000546215 SEC23AQ15436 765 aa24.45■■□□□ 1.5
SCARB1-211ENST00000546215 NEK1Q96PY6 1258 aa24.45■■□□□ 1.5
SCARB1-211ENST00000546215 ASCC2Q9H1I8 757 aaPredicted RBP24.45■■□□□ 1.5
SCARB1-211ENST00000546215 ZFYVE28Q9HCC9 887 aa24.45■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L15C9J2P7 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L13C9JLJ4 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L11C9JVI0 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L18D6R9N7 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L22D6RA61 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L17D6RBQ6 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L19D6RCP7 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L20D6RJB6 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 WDR46O15213 610 aaKnown RBP24.44■■□□□ 1.5
SCARB1-211ENST00000546215 USP17L24Q0WX57 530 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 CATSPERGQ6ZRH7 1159 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 PARK7Q99497 189 aaKnown RBP24.44■■□□□ 1.5
SCARB1-211ENST00000546215 TSKSQ9UJT2 592 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 PNMA3Q9UL41 463 aa24.44■■□□□ 1.5
SCARB1-211ENST00000546215 RAD21O60216 631 aa24.43■■□□□ 1.5
SCARB1-211ENST00000546215 OSBPP22059 807 aa24.43■■□□□ 1.5
SCARB1-211ENST00000546215 MCCP23508 829 aa24.43■■□□□ 1.5
SCARB1-211ENST00000546215 MCM5P33992 734 aa24.43■■□□□ 1.5
SCARB1-211ENST00000546215 TLR2O60603 784 aa24.42■■□□□ 1.5
SCARB1-211ENST00000546215 SLFN13Q68D06 897 aa24.42■■□□□ 1.5
SCARB1-211ENST00000546215 IGDCC4Q8TDY8 1250 aa24.42■■□□□ 1.5
SCARB1-211ENST00000546215 ADGRA2Q96PE1 1338 aa24.42■■□□□ 1.5
SCARB1-211ENST00000546215 IFIT3O14879 490 aaKnown RBP24.42■■□□□ 1.5
SCARB1-211ENST00000546215 PRC1O43663 620 aa24.42■■□□□ 1.5
SCARB1-211ENST00000546215 IRX3P78415 501 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-211ENST00000546215 NUP88Q99567 741 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-211ENST00000546215 P2RX7Q99572 595 aaKnown RBP24.42■■□□□ 1.5
SCARB1-211ENST00000546215 MTA3Q9BTC8 594 aa24.42■■□□□ 1.5
SCARB1-211ENST00000546215 SART3Q15020 963 aaKnown RBP24.41■■□□□ 1.5
SCARB1-211ENST00000546215 FAM83BQ5T0W9 1011 aa24.41■■□□□ 1.5
SCARB1-211ENST00000546215 IFIT1BQ5T764 474 aaKnown RBP24.41■■□□□ 1.5
SCARB1-211ENST00000546215 GMCL1Q96IK5 515 aa24.41■■□□□ 1.5
SCARB1-211ENST00000546215 TANGO6Q9C0B7 1094 aa24.41■■□□□ 1.5
SCARB1-211ENST00000546215 EXOSC10Q01780 885 aaKnown RBP24.4■■□□□ 1.5
SCARB1-211ENST00000546215 DHX32Q7L7V1 743 aaKnown RBP24.4■■□□□ 1.5
SCARB1-211ENST00000546215 JAKMIP1Q96N16 626 aaKnown RBP24.4■■□□□ 1.5
SCARB1-211ENST00000546215 ERICH2A1L162 156 aa24.39■■□□□ 1.5
SCARB1-211ENST00000546215 HMGB1P09429 215 aaKnown RBP24.39■■□□□ 1.5
SCARB1-211ENST00000546215 HSPA8P11142 646 aaKnown RBP24.39■■□□□ 1.5
SCARB1-211ENST00000546215 HERVK_113P62684 666 aa24.39■■□□□ 1.5
SCARB1-211ENST00000546215 TMEM67Q5HYA8 995 aa24.39■■□□□ 1.5
SCARB1-211ENST00000546215 C17orf99Q6UX52 265 aa24.39■■□□□ 1.5
SCARB1-211ENST00000546215 PNMA1Q8ND90 353 aa24.39■■□□□ 1.5
SCARB1-211ENST00000546215 SMCR8Q8TEV9 937 aaPredicted RBP24.39■■□□□ 1.5
SCARB1-211ENST00000546215 KAT14Q9H8E8 782 aa24.39■■□□□ 1.5
SCARB1-211ENST00000546215 SENP2Q9HC62 589 aa24.39■■□□□ 1.5
SCARB1-211ENST00000546215 RLFQ13129 1914 aa24.39■■□□□ 1.5
SCARB1-211ENST00000546215 SLC1A4P43007 532 aa24.38■■□□□ 1.49
SCARB1-211ENST00000546215 CTCFP49711 727 aaPredicted RBP24.38■■□□□ 1.49
SCARB1-211ENST00000546215 COG2Q14746 738 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms