RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TBC1D8O95759 1140 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 HOXA7P31268 230 aaPredicted RBP24.14■■□□□ 1.45
HMGA2-211ENST00000545998 HSPA4P34932 840 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 CRHR2Q13324 411 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 TSGA10IPQ3SY00 556 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 LPAR1Q92633 364 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 KCNB2Q92953 911 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 USP26Q9BXU7 913 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 R3HDMLQ9H3Y0 253 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 GOPCQ9HD26 462 aa24.14■■□□□ 1.45
HMGA2-211ENST00000545998 PABPC4Q13310 644 aaKnown RBP eCLIP24.13■■□□□ 1.45
HMGA2-211ENST00000545998 RCSD1Q6JBY9 416 aa24.13■■□□□ 1.45
HMGA2-211ENST00000545998 CYB5R4Q7L1T6 521 aa24.13■■□□□ 1.45
HMGA2-211ENST00000545998 RALYLQ86SE5 291 aaKnown RBP24.13■■□□□ 1.45
HMGA2-211ENST00000545998 IQCA1Q86XH1 822 aa24.13■■□□□ 1.45
HMGA2-211ENST00000545998 RASEFQ8IZ41 740 aa24.13■■□□□ 1.45
HMGA2-211ENST00000545998 LRRC47Q8N1G4 583 aaKnown RBP24.13■■□□□ 1.45
HMGA2-211ENST00000545998 ZKSCAN3Q9BRR0 538 aa24.13■■□□□ 1.45
HMGA2-211ENST00000545998 TSKSQ9UJT2 592 aa24.13■■□□□ 1.45
HMGA2-211ENST00000545998 C8orf34Q49A92 452 aa24.12■■□□□ 1.45
HMGA2-211ENST00000545998 SPICE1Q8N0Z3 855 aa24.12■■□□□ 1.45
HMGA2-211ENST00000545998 TTC14Q96N46 770 aa24.12■■□□□ 1.45
HMGA2-211ENST00000545998 ZFYVE28Q9HCC9 887 aa24.12■■□□□ 1.45
HMGA2-211ENST00000545998 CYP2C8P10632 490 aa24.12■■□□□ 1.45
HMGA2-211ENST00000545998 ZKSCAN1P17029 563 aaPredicted RBP24.12■■□□□ 1.45
HMGA2-211ENST00000545998 CCDC178Q5BJE1 867 aa24.12■■□□□ 1.45
HMGA2-211ENST00000545998 MB21D2Q8IYB1 491 aaPredicted RBP24.12■■□□□ 1.45
HMGA2-211ENST00000545998 GMCL1P1Q8NEA9 526 aa24.12■■□□□ 1.45
HMGA2-211ENST00000545998 ZSCAN10Q96SZ4 725 aaPredicted RBP24.12■■□□□ 1.45
HMGA2-211ENST00000545998 PARK7Q99497 189 aaKnown RBP24.12■■□□□ 1.45
HMGA2-211ENST00000545998 ASCC2Q9H1I8 757 aaPredicted RBP24.12■■□□□ 1.45
HMGA2-211ENST00000545998 RPAP3Q9H6T3 665 aaPredicted RBP24.12■■□□□ 1.45
HMGA2-211ENST00000545998 PNMA3Q9UL41 463 aa24.12■■□□□ 1.45
HMGA2-211ENST00000545998 F5H6K3 240 aa24.11■■□□□ 1.45
HMGA2-211ENST00000545998 KLRC3Q07444 240 aa24.11■■□□□ 1.45
HMGA2-211ENST00000545998 CATSPERGQ6ZRH7 1159 aa24.11■■□□□ 1.45
HMGA2-211ENST00000545998 DGKHQ86XP1 1220 aa24.11■■□□□ 1.45
HMGA2-211ENST00000545998 TMEM47Q9BQJ4 181 aa24.11■■□□□ 1.45
HMGA2-211ENST00000545998 RLFQ13129 1914 aa24.11■■□□□ 1.45
HMGA2-211ENST00000545998 TNKSO95271 1327 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 ADGRA2Q96PE1 1338 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L15C9J2P7 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L13C9JLJ4 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L11C9JVI0 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L18D6R9N7 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L22D6RA61 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L17D6RBQ6 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L19D6RCP7 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L20D6RJB6 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 EIF5BO60841 1220 aaKnown RBP24.1■■□□□ 1.45
HMGA2-211ENST00000545998 NDUFB10O96000 172 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 HSPA8P11142 646 aaKnown RBP24.1■■□□□ 1.45
HMGA2-211ENST00000545998 OSBPP22059 807 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 USP17L24Q0WX57 530 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 ENAHQ8N8S7 591 aaPredicted RBP24.1■■□□□ 1.45
HMGA2-211ENST00000545998 ANKS1AQ92625 1134 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 PARP14Q460N5 1801 aa24.1■■□□□ 1.45
HMGA2-211ENST00000545998 WDR46O15213 610 aaKnown RBP24.09■■□□□ 1.45
HMGA2-211ENST00000545998 RAD21O60216 631 aa24.09■■□□□ 1.45
HMGA2-211ENST00000545998 TLR2O60603 784 aa24.09■■□□□ 1.45
HMGA2-211ENST00000545998 SEC24BO95487 1268 aa24.09■■□□□ 1.45
HMGA2-211ENST00000545998 TOP1P11387 765 aaKnown RBP24.09■■□□□ 1.45
HMGA2-211ENST00000545998 CTCFP49711 727 aaPredicted RBP24.09■■□□□ 1.45
HMGA2-211ENST00000545998 COL9A3Q14050 684 aaPredicted RBP24.09■■□□□ 1.45
HMGA2-211ENST00000545998 UBAC1Q9BSL1 405 aa24.09■■□□□ 1.45
HMGA2-211ENST00000545998 SNX14Q9Y5W7 946 aa24.09■■□□□ 1.45
HMGA2-211ENST00000545998 ANTXR2P58335 489 aa24.08■■□□□ 1.45
HMGA2-211ENST00000545998 IRX3P78415 501 aaPredicted RBP24.08■■□□□ 1.45
HMGA2-211ENST00000545998 KRT32Q14532 448 aa24.08■■□□□ 1.45
HMGA2-211ENST00000545998 ADCK5Q3MIX3 580 aa24.08■■□□□ 1.45
HMGA2-211ENST00000545998 SEC23AQ15436 765 aa24.08■■□□□ 1.44
HMGA2-211ENST00000545998 NOM1Q5C9Z4 860 aaKnown RBP24.08■■□□□ 1.44
HMGA2-211ENST00000545998 CHST3Q7LGC8 479 aa24.08■■□□□ 1.44
HMGA2-211ENST00000545998 P2RX7Q99572 595 aaKnown RBP24.08■■□□□ 1.44
HMGA2-211ENST00000545998 FAM83BQ5T0W9 1011 aa24.07■■□□□ 1.44
HMGA2-211ENST00000545998 SLFN13Q68D06 897 aa24.07■■□□□ 1.44
HMGA2-211ENST00000545998 SMCR8Q8TEV9 937 aaPredicted RBP24.07■■□□□ 1.44
HMGA2-211ENST00000545998 TANGO6Q9C0B7 1094 aa24.07■■□□□ 1.44
HMGA2-211ENST00000545998 CASP8AP2Q9UKL3 1982 aa24.07■■□□□ 1.44
HMGA2-211ENST00000545998 GPR25O00155 361 aa24.06■■□□□ 1.44
HMGA2-211ENST00000545998 MCM5P33992 734 aa24.06■■□□□ 1.44
HMGA2-211ENST00000545998 C17orf99Q6UX52 265 aa24.06■■□□□ 1.44
HMGA2-211ENST00000545998 GMCL1Q96IK5 515 aa24.06■■□□□ 1.44
HMGA2-211ENST00000545998 NEK1Q96PY6 1258 aa24.06■■□□□ 1.44
HMGA2-211ENST00000545998 NUP88Q99567 741 aaPredicted RBP24.06■■□□□ 1.44
HMGA2-211ENST00000545998 IFIT3O14879 490 aaKnown RBP24.05■■□□□ 1.44
HMGA2-211ENST00000545998 PRC1O43663 620 aa24.05■■□□□ 1.44
HMGA2-211ENST00000545998 MCCP23508 829 aa24.05■■□□□ 1.44
HMGA2-211ENST00000545998 LBX1P52954 281 aa24.05■■□□□ 1.44
HMGA2-211ENST00000545998 HERVK_113P62684 666 aa24.05■■□□□ 1.44
HMGA2-211ENST00000545998 SART3Q15020 963 aaKnown RBP24.04■■□□□ 1.44
HMGA2-211ENST00000545998 IFIT1BQ5T764 474 aaKnown RBP24.04■■□□□ 1.44
HMGA2-211ENST00000545998 IGDCC4Q8TDY8 1250 aa24.04■■□□□ 1.44
HMGA2-211ENST00000545998 MTA3Q9BTC8 594 aa24.04■■□□□ 1.44
HMGA2-211ENST00000545998 CPA4Q9UI42 421 aa24.04■■□□□ 1.44
HMGA2-211ENST00000545998 BCRP11274 1271 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 GCLCP48506 637 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-211ENST00000545998 COG2Q14746 738 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 POTEEQ6S8J3 1075 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 RASGRP2Q7LDG7 609 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms