RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 ARPP21Q9UBL0 812 aaPredicted RBP12.83□□□□□ -0.35
CHEK1-218ENST00000544373 TMX2Q9Y320 296 aa12.83□□□□□ -0.35
CHEK1-218ENST00000544373 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.35
CHEK1-218ENST00000544373 RBBP6Q7Z6E9 1792 aaKnown RBP12.83□□□□□ -0.36
CHEK1-218ENST00000544373 MGAMO43451 1857 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 SGPL1O95470 568 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 IGHDP01880 384 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 APPP05067 770 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.36
CHEK1-218ENST00000544373 MAPK4P31152 587 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 ZMYM1Q5SVZ6 1142 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 LBX2Q6XYB7 198 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 GTF3C2Q8WUA4 911 aaPredicted RBP12.83□□□□□ -0.36
CHEK1-218ENST00000544373 TRIB2Q92519 343 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 USP6NLQ92738 828 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 DEFB118Q96PH6 123 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 STAP2Q9UGK3 403 aa12.83□□□□□ -0.36
CHEK1-218ENST00000544373 PATL2C9JE40 543 aaKnown RBP12.82□□□□□ -0.36
CHEK1-218ENST00000544373 PRDM1O75626 825 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 HMGCRP04035 888 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 RASA1P20936 1047 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 PDE1AP54750 535 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 COG2Q14746 738 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 MORN1Q5T089 497 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 PLEKHH3Q7Z736 793 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 UBE2Q1Q7Z7E8 422 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 IFNL3Q8IZI9 196 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 NKX2-3Q8TAU0 364 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 NUDT12Q9BQG2 462 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 TANGO6Q9C0B7 1094 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 ARHGEF10LQ9HCE6 1279 aa12.82□□□□□ -0.36
CHEK1-218ENST00000544373 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
CHEK1-218ENST00000544373 BAZ2AQ9UIF9 1905 aaKnown RBP12.82□□□□□ -0.36
CHEK1-218ENST00000544373 FOXP2O15409 715 aa12.81□□□□□ -0.36
CHEK1-218ENST00000544373 TDO2P48775 406 aa12.81□□□□□ -0.36
CHEK1-218ENST00000544373 CCL14Q16627 93 aa12.81□□□□□ -0.36
CHEK1-218ENST00000544373 CCAR1Q8IX12 1150 aaKnown RBP12.81□□□□□ -0.36
CHEK1-218ENST00000544373 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
CHEK1-218ENST00000544373 VCPKMTQ9H867 229 aa12.81□□□□□ -0.36
CHEK1-218ENST00000544373 KANSL2Q9H9L4 492 aa12.81□□□□□ -0.36
CHEK1-218ENST00000544373 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
CHEK1-218ENST00000544373 XRCC5P13010 732 aaKnown RBP12.8□□□□□ -0.36
CHEK1-218ENST00000544373 GNAT2P19087 354 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
CHEK1-218ENST00000544373 WDR78Q5VTH9 848 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 ATG4CQ96DT6 458 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHEK1-218ENST00000544373 MKNK2Q9HBH9 465 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 HOXC10Q9NYD6 342 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
CHEK1-218ENST00000544373 ROBO3Q96MS0 1386 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 FLOT1O75955 427 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 TFRCP02786 760 aaKnown RBP12.8□□□□□ -0.36
CHEK1-218ENST00000544373 SOCS4Q8WXH5 440 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 LPAR1Q92633 364 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 MOV10L1Q9BXT6 1211 aaKnown RBP12.8□□□□□ -0.36
CHEK1-218ENST00000544373 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
CHEK1-218ENST00000544373 FBXO28Q9NVF7 368 aa12.8□□□□□ -0.36
CHEK1-218ENST00000544373 RPTORQ8N122 1335 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 RAD21O60216 631 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
CHEK1-218ENST00000544373 PTPREP23469 700 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 RGS2P41220 211 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 CCNA1P78396 465 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 MAP3K21Q5TCX8 1036 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 VPS53Q5VIR6 699 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 EVI5LQ96CN4 794 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 CRISPLD2Q9H0B8 497 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 SH2D4AQ9H788 454 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 CWC22Q9HCG8 908 aaKnown RBP12.79□□□□□ -0.36
CHEK1-218ENST00000544373 INCENPQ9NQS7 918 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 FLRT1Q9NZU1 646 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 MYH7P12883 1935 aa12.79□□□□□ -0.36
CHEK1-218ENST00000544373 PLXNB2O15031 1838 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 IGKV6D-41A0A0C4DH26 115 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 FARP2O94887 1054 aaPredicted RBP12.78□□□□□ -0.36
CHEK1-218ENST00000544373 CACNB2Q08289 660 aaPredicted RBP12.78□□□□□ -0.36
CHEK1-218ENST00000544373 MAP2K5Q13163 448 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 AAMPQ13685 434 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 FAM83BQ5T0W9 1011 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 DIS3LQ8TF46 1054 aaKnown RBP12.78□□□□□ -0.36
CHEK1-218ENST00000544373 FAM227BQ96M60 508 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
CHEK1-218ENST00000544373 NACAP1Q9BZK3 213 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 SPATC1LQ9H0A9 340 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
CHEK1-218ENST00000544373 TACC3Q9Y6A5 838 aa12.78□□□□□ -0.36
CHEK1-218ENST00000544373 SLC15A5A6NIM6 579 aa12.77□□□□□ -0.36
CHEK1-218ENST00000544373 H0YGN5 161 aa12.77□□□□□ -0.36
CHEK1-218ENST00000544373 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.36
CHEK1-218ENST00000544373 ZKSCAN1P17029 563 aaPredicted RBP12.77□□□□□ -0.36
CHEK1-218ENST00000544373 ERCC3P19447 782 aa12.77□□□□□ -0.36
CHEK1-218ENST00000544373 GRB14Q14449 540 aa12.77□□□□□ -0.36
CHEK1-218ENST00000544373 PLS1Q14651 629 aa12.77□□□□□ -0.36
CHEK1-218ENST00000544373 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms