RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 SUSD2Q9UGT4 822 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 ASMTLO95671 621 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 NFICP08651 508 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 GLB1P16278 677 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 C21orf62-AS1Q17RA5 79 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 BBS9Q3SYG4 887 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 FOXB2Q5VYV0 432 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 C16orf86Q6ZW13 317 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 ANKRD13AQ8IZ07 590 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 FBLIM1Q8WUP2 373 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 UBL7Q96S82 380 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-207ENST00000544052 ACSS3Q9H6R3 686 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 APEX2Q9UBZ4 518 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 PCOLCE2Q9UKZ9 415 aa5.35□□□□□ -1.55
SCFD1-207ENST00000544052 NACADO15069 1562 aa5.34□□□□□ -1.55
SCFD1-207ENST00000544052 LRIG2O94898 1065 aa5.34□□□□□ -1.55
SCFD1-207ENST00000544052 PTPROQ16827 1216 aa5.34□□□□□ -1.55
SCFD1-207ENST00000544052 YOD1Q5VVQ6 348 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-207ENST00000544052 CCDC144CPQ8IYA2 1237 aa5.34□□□□□ -1.55
SCFD1-207ENST00000544052 PPP1R14AQ96A00 147 aa5.34□□□□□ -1.55
SCFD1-207ENST00000544052 ZNF669Q96BR6 464 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-207ENST00000544052 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCFD1-207ENST00000544052 CWC22Q9HCG8 908 aaKnown RBP5.34□□□□□ -1.55
SCFD1-207ENST00000544052 CD2APQ9Y5K6 639 aa5.34□□□□□ -1.55
SCFD1-207ENST00000544052 SART1O43290 800 aaKnown RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 APBA3O96018 575 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 ITGB7P26010 798 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 L1CAMP32004 1257 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 USP11P51784 963 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 SGO2Q562F6 1265 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 RNF187Q5TA31 235 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 HEATR6Q6AI08 1181 aaKnown RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 CDH24Q86UP0 819 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 ZBTB38Q8NAP3 1195 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 LENG1Q96BZ8 264 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 MIPEPQ99797 713 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 MKRN2Q9H000 416 aaKnown RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 EPN3Q9H201 632 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 A0A1W2PQU0 124 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 ANKRD34BA5PLL1 514 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 SHOXO15266 292 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 SLITRK5O94991 958 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 IREB2P48200 963 aaKnown RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 CBX2Q14781 532 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 LETMD1Q6P1Q0 360 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 LRRC47Q8N1G4 583 aaKnown RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 MFSD2AQ8NA29 543 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 DNAJB8Q8NHS0 232 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 FEZ1Q99689 392 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 KLHL25Q9H0H3 589 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 COL17A1Q9UMD9 1497 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-207ENST00000544052 CEP131Q9UPN4 1083 aa5.33□□□□□ -1.56
SCFD1-207ENST00000544052 TBX1O43435 398 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 GAS2O43903 313 aaKnown RBP5.32□□□□□ -1.56
SCFD1-207ENST00000544052 NOS3P29474 1203 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 GRIA2P42262 883 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 ZMYM1Q5SVZ6 1142 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 NBPF12Q5TAG4 269 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-207ENST00000544052 ADAT2Q7Z6V5 191 aaKnown RBP5.32□□□□□ -1.56
SCFD1-207ENST00000544052 ZNF513Q8N8E2 541 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-207ENST00000544052 LRRN4CLQ8ND94 238 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 VWCEQ96DN2 955 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 EXOC2Q96KP1 924 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 PSMG3-AS1Q96PY0 264 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 SLKQ9H2G2 1235 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-207ENST00000544052 ARHGEF4Q9NR80 690 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 LRP2BPQ9P2M1 347 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 ZNF451Q9Y4E5 1061 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 ITGAVP06756 1048 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 PPP2R2AP63151 447 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 CDK5R2Q13319 367 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 TCEA2Q15560 299 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 DALRD3Q5D0E6 543 aaKnown RBP5.32□□□□□ -1.56
SCFD1-207ENST00000544052 ZSWIM2Q8NEG5 633 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 ADCY4Q8NFM4 1077 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 WFDC12Q8WWY7 111 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 KREMEN1Q96MU8 473 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 APBA2Q99767 749 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 SPC25Q9HBM1 224 aa5.32□□□□□ -1.56
SCFD1-207ENST00000544052 BICRAQ9NZM4 1560 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 CNTNAP4Q9C0A0 1308 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 IQCA1LA6NCM1 817 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 DNAJC6O75061 913 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 CD247P20963 164 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 CDK11BP21127 795 aaKnown RBP5.31□□□□□ -1.56
SCFD1-207ENST00000544052 AUHQ13825 339 aaKnown RBP5.31□□□□□ -1.56
SCFD1-207ENST00000544052 RSPO4Q2I0M5 234 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-207ENST00000544052 TMEM67Q5HYA8 995 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 FAM209AQ5JX71 171 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 Q6ZS46 218 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 FAM46AQ96IP4 442 aaKnown RBP5.31□□□□□ -1.56
SCFD1-207ENST00000544052 NACC1Q96RE7 527 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 CEP41Q9BYV8 373 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 SUGT1Q9Y2Z0 365 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 COL4A3BPQ9Y5P4 624 aa5.31□□□□□ -1.56
SCFD1-207ENST00000544052 hCG_2014768A0A024R1R8 64 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 AGRPO00253 132 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 BMP3P12645 472 aa5.3□□□□□ -1.56
SCFD1-207ENST00000544052 SNW1Q13573 536 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms